RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CBFA2T2O43439 604 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 COL6A1P12109 1028 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 TFAP4Q01664 338 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 SEPT2Q15019 361 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 CT47A1Q5JQC4 288 aaPredicted RBP14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 TMEM179Q6ZVK1 233 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 SPC24Q8NBT2 197 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 MYL10Q9BUA6 226 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 SENP2Q9HC62 589 aa14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
SMARCB1-203ENST00000407082 COL9A1P20849 921 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 PTPREP23469 700 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 CALML3P27482 149 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 MARCKSP29966 332 aaPredicted RBP14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 MAP3K21Q5TCX8 1036 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 DGKHQ86XP1 1220 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 CNNM3Q8NE01 707 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 KIAA1524Q8TCG1 905 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 MYLIPQ8WY64 445 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 AIFM3Q96NN9 605 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 SEMA6BQ9H3T3 888 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 TUBE1Q9UJT0 475 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 KCNH3Q9ULD8 1083 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 PTPRFP10586 1907 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 MYH8P13535 1937 aa14.64□□□□□ -0.07
SMARCB1-203ENST00000407082 AP5Z1O43299 807 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 TRAPPC10P48553 1259 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 CCL14Q16627 93 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 LHX8Q68G74 356 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 C11orf57Q6ZUT1 292 aaPredicted RBP14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 CCDC186Q7Z3E2 898 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 TRIML1Q8N9V2 468 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 GPRC5AQ8NFJ5 357 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 NEDD1Q8NHV4 660 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 ANKS1AQ92625 1134 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 FERMT2Q96AC1 680 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 P2RX7Q99572 595 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 LZTS2Q9BRK4 669 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 AS3MTQ9HBK9 375 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 SH3GLB2Q9NR46 395 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 SRPRBQ9Y5M8 271 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
SMARCB1-203ENST00000407082 BTBD18B2RXH4 712 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 XRCC5P13010 732 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 CNGA1P29973 690 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 KRBA2Q6ZNG9 492 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 TMTC3Q6ZXV5 915 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 MTERF4Q7Z6M4 381 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 DHX40Q8IX18 779 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 AOPEPQ8N6M6 819 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 SYMPKQ92797 1274 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 WDR18Q9BV38 432 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 PHF20Q9BVI0 1012 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 TCP11L1Q9NUJ3 509 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 PHIPQ8WWQ0 1821 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 ATAD5Q96QE3 1844 aa14.62□□□□□ -0.07
SMARCB1-203ENST00000407082 DYNC1I1O14576 645 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 SMC2O95347 1197 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 FOSL2P15408 326 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 RGS2P41220 211 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 ICA1Q05084 483 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 TROAPQ12815 778 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 SHHQ15465 462 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 GALNT17Q6IS24 598 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 SHC4Q6S5L8 630 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 CEP95Q96GE4 821 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 MAP7D2Q96T17 732 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 PAGR1Q9BTK6 254 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 TXNRD2Q9NNW7 524 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 MTMR4Q9NYA4 1195 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 ATP11BQ9Y2G3 1177 aa14.61□□□□□ -0.07
SMARCB1-203ENST00000407082 IGKV6D-41A0A0C4DH26 115 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 NMT2O60551 498 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 TUBB4AP04350 444 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 PTGS1P23219 599 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 MAPK4P31152 587 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 MTMR2Q13614 643 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
SMARCB1-203ENST00000407082 CCDC150Q8NCX0 1101 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms