RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ASNSP08243 561 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 ARHGAP4P98171 946 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 TNFAIP1Q13829 316 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 PTPN21Q16825 1174 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 SPECC1LQ69YQ0 1117 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 GIMAP8Q8ND71 665 aaPredicted RBP27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 ZYXQ15942 572 aaKnown RBP27.67■■■□□ 2.02
DNMT3A-206ENST00000406659 MBOAT7Q96N66 472 aa27.67■■■□□ 2.02
DNMT3A-206ENST00000406659 BLOC1S4Q9NUP1 217 aa27.67■■■□□ 2.02
DNMT3A-206ENST00000406659 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.67■■■□□ 2.02
DNMT3A-206ENST00000406659 SPAG1Q07617 926 aa27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 PDE4DQ08499 809 aa27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 TBX2Q13207 712 aaPredicted RBP27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 MCM6Q14566 821 aa27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 APTXQ7Z2E3 356 aaKnown RBP27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 CCDC112Q8NEF3 446 aa27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 LARP4BQ92615 738 aaKnown RBP27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 LTBP3Q9NS15 1303 aa27.66■■■□□ 2.02
DNMT3A-206ENST00000406659 H7C1D1 291 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 PSMA7O14818 248 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 TPM2P07951 284 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 TMEM119Q4V9L6 283 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 FAM160B2Q86V87 743 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 ANKRD20A12PQ8NF67 263 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 RAD54LQ92698 747 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 KIFC2Q96AC6 838 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 LRRC27Q9C0I9 530 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 PLA2G6O60733 806 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 GMPSP49915 693 aaPredicted RBP27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 SLFN12Q8IYM2 578 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 GJA10Q969M2 543 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 P2RX7Q99572 595 aaKnown RBP27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 NUDT12Q9BQG2 462 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 KCNMB3Q9NPA1 279 aa27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 ADD3Q9UEY8 706 aaKnown RBP27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 GOLGB1Q14789 3259 aaKnown RBP27.65■■■□□ 2.02
DNMT3A-206ENST00000406659 TAL1P17542 331 aaPredicted RBP27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 SREBF1P36956 1147 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 CRYGNQ8WXF5 182 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 PRIMPOLQ96LW4 560 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 KCND1Q9NSA2 647 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 LIMA1Q9UHB6 759 aaKnown RBP27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 FEM1BQ9UK73 627 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 SCAF8Q9UPN6 1271 aaKnown RBP27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 GJA3Q9Y6H8 435 aa27.64■■■□□ 2.02
DNMT3A-206ENST00000406659 OPLAHO14841 1288 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 RASSF7Q02833 373 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 CCDC174Q6PII3 467 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 TEX2Q8IWB9 1127 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 MICALL2Q8IY33 904 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 DHTKD1Q96HY7 919 aaPredicted RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 C16orf45Q96MC5 204 aaPredicted RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 PIK3CDO00329 1044 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 TEX33O43247 280 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 HOXA13P31271 388 aaPredicted RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 CCT6AP40227 531 aaKnown RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 PPP1R2P41236 205 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 KCNJ6P48051 423 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 CNNM4Q6P4Q7 775 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 CCAR2Q8N163 923 aaKnown RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 SGIP1Q9BQI5 828 aa27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 RANBP17Q9H2T7 1088 aaKnown RBP27.63■■■□□ 2.01
DNMT3A-206ENST00000406659 KDM3AQ9Y4C1 1321 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 MYMKA6NI61 221 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 SLC26A4O43511 780 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 EGFRP00533 1210 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 KRT31Q15323 416 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 Q4G0T1 1027 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 PRR16Q569H4 304 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 FEZ1Q99689 392 aa27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 GLIS2Q9BZE0 524 aaPredicted RBP27.62■■■□□ 2.01
DNMT3A-206ENST00000406659 PVALEFA0A1B0GWK0 134 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 PHF20L1A8MW92 1017 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 KCNJ18B7U540 433 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 KCNJ12Q14500 433 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 TCP11X2Q5H9J9 407 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 UIMC1Q96RL1 719 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 NT5C3AQ9H0P0 336 aa27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 TRMT1Q9NXH9 659 aaKnown RBP27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 CNOT7Q9UIV1 285 aaKnown RBP27.61■■■□□ 2.01
DNMT3A-206ENST00000406659 USP27XA6NNY8 438 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TBX3O15119 743 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TNNT1P13805 278 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 GOLGA8FQ08AF8 430 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 GOLGA8DPQ0D2H9 430 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 SAMD1Q6SPF0 538 aaPredicted RBP27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 CCDC84Q86UT8 332 aaPredicted RBP27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TEPSINQ96N21 525 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 ZNF341Q9BYN7 854 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TMX1Q9H3N1 280 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 MRPL11Q9Y3B7 192 aaKnown RBP27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TRIM49BA6NDI0 452 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 LRRC10BA6NIK2 292 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 FZD9O00144 591 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 TBC1D10BQ4KMP7 808 aaPredicted RBP27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 HYIQ5T013 277 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 UNC13DQ70J99 1090 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 SAMD7Q7Z3H4 446 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 CREBRFQ8IUR6 639 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 NOC3LQ8WTT2 800 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms