RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 IGFBP4P22692 258 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 ADORA2AP29274 412 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
RPAIN-204ENST00000405578 ADGRE1Q14246 886 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 TMEM132BQ14DG7 1078 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 PRAMEF19Q5SWL8 479 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 SNRNP48Q6IEG0 339 aaKnown RBP12.19□□□□□ -0.46
RPAIN-204ENST00000405578 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 SHCBP1Q8NEM2 672 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 PBX4Q9BYU1 374 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 MROH8Q9H579 483 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 SH2B1Q9NRF2 756 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-204ENST00000405578 FBXO40Q9UH90 709 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 PHF24Q9UPV7 400 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 PNMA6FA0A0J9YX94 578 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 ZBTB5O15062 677 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 PFKFB2O60825 505 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 STK3Q13188 491 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 CDC37Q16543 378 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.463e-12■□□□□ 9
RPAIN-204ENST00000405578 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 RIOX1Q9H6W3 641 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 JMJD4Q9H9V9 463 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 ZNF214Q9UL59 606 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-204ENST00000405578 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 NID2Q14112 1375 aa12.18□□□□□ -0.46
RPAIN-204ENST00000405578 MUC6Q6W4X9 2439 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 CHD7Q9P2D1 2997 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 COBLO75128 1261 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
RPAIN-204ENST00000405578 REPS2Q8NFH8 660 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 XPNPEP3Q9NQH7 507 aa12.17□□□□□ -0.46
RPAIN-204ENST00000405578 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-204ENST00000405578 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 STRNO43815 780 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 PGK1P00558 417 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 FCER1AP12319 257 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 ALAS1P13196 640 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 IFNAR1P17181 557 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 ERCC3P19447 782 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 CDC27P30260 824 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 SNAP25P60880 206 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
RPAIN-204ENST00000405578 KCTD2Q14681 263 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
RPAIN-204ENST00000405578 PIBF1Q8WXW3 757 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 PIGSQ96S52 555 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 ACAD9Q9H845 621 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
RPAIN-204ENST00000405578 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
RPAIN-204ENST00000405578 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
RPAIN-204ENST00000405578 ABCB11O95342 1321 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 CYTH3O43739 400 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 RARBP10826 455 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 SCRN1Q12765 414 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ME3Q16798 604 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 USH1GQ495M9 461 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 RNF180Q86T96 592 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ABRAQ8N0Z2 381 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ZNF713Q8N859 430 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 GTF3C6Q969F1 213 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 RNF26Q9BY78 433 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 MAF1Q9H063 256 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 HOMER2Q9NSB8 354 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 CXXC1Q9P0U4 656 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms