RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 ZNF18P17022 549 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 ZSCAN20P17040 1043 aaPredicted RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 AMPD3Q01432 767 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 ZYXQ15942 572 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 TRMT44Q8IYL2 757 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 DEFB129Q9H1M3 183 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 SCAF8Q9UPN6 1271 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 CDK11BP21127 795 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 KLHL10Q6JEL2 608 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 FILIP1Q7Z7B0 1213 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 SLFN12Q8IYM2 578 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 HAS1Q92839 578 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
SMS-202ENST00000404933 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 PCDHA12Q9UN75 941 aa13.29□□□□□ -0.28
SMS-202ENST00000404933 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 SLC26A4O43511 780 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 SREBF1P36956 1147 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 CACTINQ8WUQ7 758 aaKnown RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 LPAR1Q92633 364 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 MED15Q96RN5 788 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 C7orf25Q9BPX7 421 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
SMS-202ENST00000404933 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
SMS-202ENST00000404933 POTEMA6NI47 508 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 OPLAHO14841 1288 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 WDR46O15213 610 aaKnown RBP13.27□□□□□ -0.28
SMS-202ENST00000404933 RHOBTB3O94955 611 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 GRB10Q13322 594 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 CCDC174Q6PII3 467 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 SV2BQ7L1I2 683 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 LRRC15Q8TF66 581 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 KIAA1683Q9H0B3 1180 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 SPON1Q9HCB6 807 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 KCNMB3Q9NPA1 279 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 KCND1Q9NSA2 647 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 OGFRQ9NZT2 677 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 RWDD2AQ9UIY3 292 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 SMCHD1A6NHR9 2005 aa13.27□□□□□ -0.28
SMS-202ENST00000404933 DOCK1Q14185 1865 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 TBX3O15119 743 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 KLRC4O43908 158 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 LMNB1P20700 586 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 FAM193AP78312 1265 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 LRMPQ12912 555 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 PAK1Q13153 545 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 STIM1Q13586 685 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 Q4G0T1 1027 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 GPC2Q8N158 579 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 PNMA5Q96PV4 448 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 P2RX7Q99572 595 aaKnown RBP13.27□□□□□ -0.29
SMS-202ENST00000404933 TRIM9Q9C026 710 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 SAMSN1Q9NSI8 373 aaKnown RBP13.27□□□□□ -0.29
SMS-202ENST00000404933 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
SMS-202ENST00000404933 CTNND2Q9UQB3 1225 aa13.27□□□□□ -0.29
SMS-202ENST00000404933 ABCB11O95342 1321 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 KDM3AQ9Y4C1 1321 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 CYP3A4P08684 503 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 POLR2MP0CAP2 368 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 CIITAP33076 1130 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 STX17P56962 302 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 NBPF12Q5TAG4 269 aaPredicted RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
SMS-202ENST00000404933 EHMT1Q9H9B1 1298 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 SBF1O95248 1867 aa13.26□□□□□ -0.29
SMS-202ENST00000404933 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
SMS-202ENST00000404933 PPP1R2P41236 205 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms