RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SREBF1P36956 1147 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 UBA7P41226 1012 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 USP11P51784 963 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 HERVK_113P62684 666 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 BAATQ14032 418 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 CCL15Q16663 113 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 LONRF3Q496Y0 759 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 PPP4R3AQ6IN85 833 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 SLC30A10Q6XR72 485 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 NCAPG2Q86XI2 1143 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 CNNM3Q8NE01 707 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 REPS2Q8NFH8 660 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 COL20A1Q9P218 1284 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 OTOFQ9HC10 1997 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 LAD1O00515 517 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 LETM1O95202 739 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 CETPP11597 493 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 OSBPP22059 807 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 TXLNAP40222 546 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ZNF157P51786 506 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 GTF2A2P52657 109 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PABPC4Q13310 644 aaKnown RBP eCLIP4.19□□□□□ -1.742e-7■■■□□ 16.8
RTN4-208ENST00000404909 KARSQ15046 597 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 MCTP2Q6DN12 878 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 LRSAM1Q6UWE0 723 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ANKRD35Q8N283 1001 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 RNF214Q8ND24 703 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 SYTL5Q8TDW5 730 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 RMDN3Q96TC7 470 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 TTC12Q9H892 705 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 EHMT1Q9H9B1 1298 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 BTBD7Q9P203 1132 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PNMA2Q9UL42 364 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ADAMTS5Q9UNA0 930 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 HPSEQ9Y251 543 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CENPFP49454 3210 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PHIPQ8WWQ0 1821 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 A0A087WWV3 80 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 A0A087X0B3 334 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 POTEMA6NI47 508 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ECM2O94769 699 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 MYCLP12524 364 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 GCFC2P16383 781 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 LONP1P36776 959 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 HSD17B4P51659 736 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 OAZ1P54368 228 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ZNF445P59923 1031 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MOGSQ13724 837 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 TMEM266Q2M3C6 531 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ARHGEF16Q5VV41 709 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 GPAT2Q6NUI2 795 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 POTEEQ6S8J3 1075 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 LBX2Q6XYB7 198 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PAXIP1Q6ZW49 1069 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 GRAMD1CQ8IYS0 662 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 TAAR1Q96RJ0 339 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 SPATC1LQ9H0A9 340 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ACAD9Q9H845 621 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PKD2L1Q9P0L9 805 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 SERTAD1Q9UHV2 236 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ABT1Q9ULW3 272 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 BTBD19C9JJ37 291 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PDHXO00330 501 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 BIN1O00499 593 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 FOXN1O15353 648 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PRPHP41219 470 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 AFMP43652 599 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PNOCQ13519 176 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 SPRYD7Q5W111 196 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ISM2Q6H9L7 571 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 SASS6Q6UVJ0 657 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 KRBA2Q6ZNG9 492 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MB21D1Q8N884 522 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 IL31RAQ8NI17 732 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 BRI3BPQ8WY22 251 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 STAMQ92783 540 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 HAS1Q92839 578 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MS4A4AQ96JQ5 239 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MTMR9Q96QG7 549 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 NAP1L4Q99733 375 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 TSPY26PQ9H489 355 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 TXNRD2Q9NNW7 524 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 LRWD1Q9UFC0 647 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MYPNQ86TC9 1320 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 UNCXA6NJT0 531 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CTAGE5O15320 804 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CCDC192P0DO97 292 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 ORC2Q13416 577 aaPredicted RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 Q3C1V9 767 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CEP55Q53EZ4 464 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 PLA2G4DQ86XP0 818 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CEP57L1Q8IYX8 460 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 CRYGNQ8WXF5 182 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MOV10L1Q9BXT6 1211 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 RAB34Q9BZG1 259 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 A1CFQ9NQ94 594 aaKnown RBP4.19□□□□□ -1.74
RTN4-208ENST00000404909 PNMA3Q9UL41 463 aa4.19□□□□□ -1.74
RTN4-208ENST00000404909 MYH7BA7E2Y1 1941 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CYP3A7-CYP3A51PA0A087WV96 503 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms