RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ARHGEF16Q5VV41 709 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 BAZ2BQ9UIF8 2168 aaKnown RBP15.45■□□□□ 0.06
SDF4-203ENST00000403997 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 PNMA6FA0A0J9YX94 578 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 CYTH3O43739 400 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 CDC45O75419 566 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 TXNP10599 105 aaKnown RBP15.44■□□□□ 0.06
SDF4-203ENST00000403997 EIF2AK2P19525 551 aaKnown RBP15.44■□□□□ 0.06
SDF4-203ENST00000403997 KIF5BP33176 963 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 CPT1AP50416 773 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 TTLL4Q14679 1199 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 STXBP2Q15833 593 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 BRDTQ58F21 947 aaPredicted RBP15.44■□□□□ 0.06
SDF4-203ENST00000403997 RNF20Q5VTR2 975 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 SEPT14Q6ZU15 432 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
SDF4-203ENST00000403997 COPS5Q92905 334 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 MTA3Q9BTC8 594 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 MYH6P13533 1939 aa15.44■□□□□ 0.06
SDF4-203ENST00000403997 SZT2Q5T011 3432 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 SH2B2O14492 632 aaPredicted RBP15.43■□□□□ 0.06
SDF4-203ENST00000403997 OPLAHO14841 1288 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 DDAH1O94760 285 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 TIMP1P01033 207 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 MYL3P08590 195 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 HSD17B4P51659 736 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 PSMC6P62333 389 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 C9orf50Q5SZB4 431 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 FAM126BQ8IXS8 530 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 SAMD3Q8N6K7 520 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 MAP3K14Q99558 947 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 PXMP2Q9NR77 195 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 MAP3K20Q9NYL2 800 aaKnown RBP15.43■□□□□ 0.06
SDF4-203ENST00000403997 TBX21Q9UL17 535 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 LRRC37A2A6NM11 1700 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 GRIN2DO15399 1336 aa15.43■□□□□ 0.06
SDF4-203ENST00000403997 NEFLP07196 543 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 NR3C2P08235 984 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 HOXA13P31271 388 aaPredicted RBP15.42■□□□□ 0.06
SDF4-203ENST00000403997 FPGSQ05932 587 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
SDF4-203ENST00000403997 GPR153Q6NV75 609 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 SLC43A3Q8NBI5 491 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 SEZ6LQ9BYH1 1024 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 LRRC2Q9BYS8 371 aa15.42■□□□□ 0.06
SDF4-203ENST00000403997 GCOM1H8Y6P7 765 aaPredicted RBP15.41■□□□□ 0.06
SDF4-203ENST00000403997 KPNA6O60684 536 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 EIF3JO75822 258 aaKnown RBP15.41■□□□□ 0.06
SDF4-203ENST00000403997 ARIH2O95376 493 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 CD4P01730 458 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 POLR2MP0CAP2 368 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
SDF4-203ENST00000403997 LIFRP42702 1097 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 GNAQP50148 359 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 GHRHRQ02643 423 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 LY6KQ17RY6 165 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 CCDC62Q6P9F0 684 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 DEFB123Q8N688 67 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 RRP36Q96EU6 259 aaKnown RBP15.41■□□□□ 0.06
SDF4-203ENST00000403997 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 MTG1Q9BT17 334 aaPredicted RBP15.41■□□□□ 0.06
SDF4-203ENST00000403997 SLC12A7Q9Y666 1083 aa15.41■□□□□ 0.06
SDF4-203ENST00000403997 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 GH1P01241 217 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 CALM1P0DP23 149 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 CALM2P0DP24 149 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 CALM3P0DP25 149 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 RXRAP19793 462 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 EPHB4P54760 987 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 PURAQ00577 322 aaKnown RBP15.4■□□□□ 0.06
SDF4-203ENST00000403997 MFSD5Q6N075 450 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 NEK1Q96PY6 1258 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 PDCD2LQ9BRP1 358 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 PPP1R12CQ9BZL4 782 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
SDF4-203ENST00000403997 A6NJR5 290 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 B4GALT4O60513 344 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 PLEKHA8P1O95397 391 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 SYNE3Q6ZMZ3 975 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 Q7L0L9 218 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 TMEM199Q8N511 208 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 SRBD1Q8N5C6 995 aaKnown RBP15.39■□□□□ 0.05
SDF4-203ENST00000403997 AFG1LQ8WV93 481 aa15.39■□□□□ 0.05
SDF4-203ENST00000403997 RNPC3Q96LT9 517 aaKnown RBP15.39■□□□□ 0.05
SDF4-203ENST00000403997 SEC63Q9UGP8 760 aaKnown RBP15.39■□□□□ 0.05
SDF4-203ENST00000403997 CYP2C18P33260 490 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
SDF4-203ENST00000403997 PPIGQ13427 754 aaKnown RBP eCLIP15.38■□□□□ 0.05
SDF4-203ENST00000403997 PGM5Q15124 567 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms