RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 ERICH2A1L162 156 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 ZBTB5O15062 677 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 NKRFO15226 690 aaKnown RBP eCLIP17.88■□□□□ 0.451e-6■■□□□ 14
TPM1-207ENST00000403994 ARIH2O95376 493 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 PURAQ00577 322 aaKnown RBP17.88■□□□□ 0.45
TPM1-207ENST00000403994 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 NSUN6Q8TEA1 469 aaKnown RBP17.88■□□□□ 0.45
TPM1-207ENST00000403994 COPS5Q92905 334 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 TAAR1Q96RJ0 339 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
TPM1-207ENST00000403994 POLR3EQ9NVU0 708 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 CUL9Q8IWT3 2517 aa17.88■□□□□ 0.45
TPM1-207ENST00000403994 B4GALT4O60513 344 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 HSD17B4P51659 736 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 SMAD3P84022 425 aaKnown RBP17.87■□□□□ 0.45
TPM1-207ENST00000403994 GHRHRQ02643 423 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 TROAPQ12815 778 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 ZNF697Q5TEC3 545 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 SKAP1Q86WV1 359 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 GUCD1Q96NT3 240 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 ESYT1Q9BSJ8 1104 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 TRPV6Q9H1D0 765 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
TPM1-207ENST00000403994 CFBP00751 764 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 MYL3P08590 195 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
TPM1-207ENST00000403994 CSF2RAP15509 400 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 EIF2AK2P19525 551 aaKnown RBP17.86■□□□□ 0.45
TPM1-207ENST00000403994 CYP2C18P33260 490 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.451e-7■■□□□ 14.5
TPM1-207ENST00000403994 TTLL4Q14679 1199 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
TPM1-207ENST00000403994 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.458e-7■■■□□ 15.2
TPM1-207ENST00000403994 ALDH8A1Q9H2A2 487 aaPredicted RBP17.86■□□□□ 0.45
TPM1-207ENST00000403994 HIPK3Q9H422 1215 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 PXMP2Q9NR77 195 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 PCDHA1Q9Y5I3 950 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
TPM1-207ENST00000403994 TRANK1O15050 2925 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 A6NJR5 290 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 CYTH3O43739 400 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 BRDTQ58F21 947 aaPredicted RBP17.85■□□□□ 0.45
TPM1-207ENST00000403994 CCDC62Q6P9F0 684 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 TMEM199Q8N511 208 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 IGDCC4Q8TDY8 1250 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 GBF1Q92538 1859 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 FAM161BQ96MY7 647 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 PIGSQ96S52 555 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 IWS1Q96ST2 819 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 MTG1Q9BT17 334 aaPredicted RBP17.85■□□□□ 0.45
TPM1-207ENST00000403994 NOC4LQ9BVI4 516 aaKnown RBP17.85■□□□□ 0.45
TPM1-207ENST00000403994 RIOX1Q9H6W3 641 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 LY9Q9HBG7 655 aa17.85■□□□□ 0.45
TPM1-207ENST00000403994 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
TPM1-207ENST00000403994 STXBP2Q15833 593 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 BMP2KLQ5H9B9 411 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 ARHGEF16Q5VV41 709 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 PSRC1Q6PGN9 363 aaPredicted RBP17.84■□□□□ 0.45
TPM1-207ENST00000403994 SEPT14Q6ZU15 432 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 C16orf59Q7L2K0 433 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 GPHNQ9NQX3 736 aaPredicted RBP17.84■□□□□ 0.45
TPM1-207ENST00000403994 TRMT13Q9NUP7 481 aaKnown RBP17.84■□□□□ 0.45
TPM1-207ENST00000403994 SCN5AQ14524 2016 aa17.84■□□□□ 0.45
TPM1-207ENST00000403994 MYH7BA7E2Y1 1941 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 SLC27A2O14975 620 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 PRC1O43663 620 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 DDAH1O94760 285 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.44
TPM1-207ENST00000403994 ARHGAP1Q07960 439 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 LY6KQ17RY6 165 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 MYL10Q9BUA6 226 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
TPM1-207ENST00000403994 GH1P01241 217 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 NR3C2P08235 984 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 MMP3P08254 477 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 ACRP10323 421 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 NBPF20Q3BBV1 942 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 RASIP1Q5U651 963 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 IL31RAQ8NI17 732 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 AFG1LQ8WV93 481 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 PDCD2LQ9BRP1 358 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 TTYH1Q9H313 450 aaPredicted RBP17.82■□□□□ 0.44
TPM1-207ENST00000403994 IL23AQ9NPF7 189 aa17.82■□□□□ 0.44
TPM1-207ENST00000403994 MAP3K20Q9NYL2 800 aaKnown RBP17.82■□□□□ 0.44
TPM1-207ENST00000403994 PNMA6FA0A0J9YX94 578 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
TPM1-207ENST00000403994 KPNA6O60684 536 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 EIF3JO75822 258 aaKnown RBP17.81■□□□□ 0.44
TPM1-207ENST00000403994 MCM5P33992 734 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms