RNA–Protein interactions for RNA: ENST00000403259.1

HIST1H2APS3-201, Transcript of histone cluster 1 H2A pseudogene 3, humanhuman

BASIC

Gene HIST1H2APS3, Length 134 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2APS3-201ENST00000403259 RETP07949 1114 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 KCNJ6P48051 423 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CHRNDQ07001 517 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 AIMP1Q12904 312 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 KCNC3Q14003 757 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LPAL2Q16609 132 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SHROOM1Q2M3G4 852 aaPredicted RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 C8orf34Q49A92 452 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 HS1BP3Q53T59 392 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SPECC1Q5M775 1068 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 STPG1Q5TH74 334 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 WDR78Q5VTH9 848 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SNRNP48Q6IEG0 339 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CXCL17Q6UXB2 119 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CCAR1Q8IX12 1150 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FAM181AQ8N9Y4 354 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PCSK9Q8NBP7 692 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SHCBP1Q8NEM2 672 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SAMD11Q96NU1 681 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CDC5LQ99459 802 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TINF2Q9BSI4 451 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 WDR18Q9BV38 432 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 MOV10L1Q9BXT6 1211 aaKnown RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 EMILIN3Q9NT22 766 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 RNF216Q9NWF9 866 aaPredicted RBP3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ZSCAN32Q9NX65 697 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TMOD2Q9NZR1 351 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 GMEB2Q9UKD1 530 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FBXO4Q9UKT5 387 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 RAXQ9Y2V3 346 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 INSL6Q9Y581 213 aa3.82□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NBEAL2Q6ZNJ1 2754 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 COL6A5A8TX70 2615 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FLNAP21333 2647 aaKnown RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FAM196BA6NMK8 535 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PITPNM1O00562 1244 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NARSO43776 548 aaKnown RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 STRNO43815 780 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FRAT2O75474 233 aaPredicted RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SNAI1O95863 264 aaPredicted RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CXCL10P02778 98 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 MMP1P03956 469 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 C6orf222P0C671 652 aaPredicted RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PTGS1P23219 599 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CSRP3P50461 194 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NOVA1P51513 510 aaKnown RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CTSWP56202 376 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PSMC6P62333 389 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CCNA1P78396 465 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 BEX3Q00994 111 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SCAPQ12770 1279 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TAF7Q15545 349 aaPredicted RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SKOR2Q2VWA4 1001 aaPredicted RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 C4orf17Q53FE4 359 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 GNASQ5JWF2 1037 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LAIR1Q6GTX8 287 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 KIAA1211LQ6NV74 962 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 HHIPL2Q6UWX4 724 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NFXL1Q6ZNB6 911 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ZNF804AQ7Z570 1209 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ZDHHC14Q8IZN3 488 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ATRIPQ8WXE1 791 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 VTI1AQ96AJ9 217 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CTAGE1Q96RT6 745 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ANKRD2Q9GZV1 360 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LMAN2LQ9H0V9 348 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 MYH16Q9H6N6 1097 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TBC1D17Q9HA65 648 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LIMD1Q9UGP4 676 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 DUSP12Q9UNI6 340 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 LRRFIP2Q9Y608 721 aaKnown RBP3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 IVNS1ABPQ9Y6Y0 642 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PTPRBP23467 1997 aa3.81□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FAM205CA6NFA0 338 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SPDYE16A6NNV3 312 aaPredicted RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 USP17L5A8MUK1 530 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PER1O15534 1290 aaPredicted RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TBC1D12O60347 775 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NBNO60934 754 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PCCAP05165 728 aaPredicted RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CFHP08603 1231 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ERCC3P19447 782 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NRIP1P48552 1158 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 CFHR1Q03591 330 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SERINC3Q13530 473 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 SF3A2Q15428 464 aaKnown RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ZNF792Q3KQV3 632 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NCBP3Q53F19 620 aaKnown RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TMEM184AQ6ZMB5 413 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 ABRAQ8N0Z2 381 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PLBD2Q8NHP8 589 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 FEZF2Q8TBJ5 459 aa3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TRIM44Q96DX7 344 aaPredicted RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 NAP1L5Q96NT1 182 aaPredicted RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 PURBQ96QR8 312 aaKnown RBP3.8□□□□□ -1.8
HIST1H2APS3-201ENST00000403259 TBC1D2Q9BYX2 928 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms