RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HPCAL4Q9UM19 191 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 RASSF10A6NK89 507 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 PP2D1A8MPX8 630 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 SYF2O95926 243 aaKnown RBP22.11■■□□□ 1.13
CCDC47-202ENST00000403162 CDK17Q00537 523 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 RASGRP4Q8TDF6 673 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 PSMD1Q99460 953 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 PPIP5K2O43314 1243 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 SRGAP2O75044 1071 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 RNF40O75150 1001 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 IPO7O95373 1038 aaKnown RBP22.11■■□□□ 1.13
CCDC47-202ENST00000403162 CYP2D6P10635 497 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 TRIM21P19474 475 aaKnown RBP22.11■■□□□ 1.13
CCDC47-202ENST00000403162 DGKHQ86XP1 1220 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 CSGALNACT2Q8N6G5 542 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 COG1Q8WTW3 980 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 ANKS1AQ92625 1134 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 NHEJ1Q9H9Q4 299 aaPredicted RBP22.11■■□□□ 1.13
CCDC47-202ENST00000403162 AGPAT5Q9NUQ2 364 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 PCDHA6Q9UN73 950 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 TFR2Q9UP52 801 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 PCDHA8Q9Y5H6 950 aa22.11■■□□□ 1.13
CCDC47-202ENST00000403162 ZC3H4Q9UPT8 1303 aaKnown RBP22.1■■□□□ 1.13
CCDC47-202ENST00000403162 BICDL2A1A5D9 508 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 PHACTR2O75167 634 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 PRPF6O94906 941 aaKnown RBP22.1■■□□□ 1.13
CCDC47-202ENST00000403162 CCNE1P24864 410 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 FIGNQ5HY92 759 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 TYW1BQ6NUM6 668 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 FAM114A1Q8IWE2 563 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 LACRTQ9GZZ8 138 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 CCDC88AQ3V6T2 1871 aa22.1■■□□□ 1.13
CCDC47-202ENST00000403162 A0A1W2PQJ5 194 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 RCCD1A6NED2 376 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 PPP1R2P41236 205 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 GNAQP50148 359 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 GTF2IP78347 998 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 GRM4Q14833 912 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 P2RX5Q93086 422 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 ZNF277Q9NRM2 450 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-202ENST00000403162 PRDX5P30044 214 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 TNNT3P45378 269 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-202ENST00000403162 TBC1D8BQ0IIM8 1120 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 PNMA1Q8ND90 353 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 LRRC15Q8TF66 581 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 IQCDQ96DY2 449 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 AK8Q96MA6 479 aa22.09■■□□□ 1.13
CCDC47-202ENST00000403162 FLT1P17948 1338 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 ECE2O60344 883 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 SPTY2D1Q68D10 685 aaPredicted RBP22.08■■□□□ 1.13
CCDC47-202ENST00000403162 IQCEQ6IPM2 695 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 ZSCAN29Q8IWY8 852 aaPredicted RBP22.08■■□□□ 1.13
CCDC47-202ENST00000403162 STAG2Q8N3U4 1231 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 GOLGA6L1Q8N7Z2 621 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 AFAP1L1Q8TED9 768 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 CCDC47Q96A33 483 aaKnown RBP22.08■■□□□ 1.13
CCDC47-202ENST00000403162 CAPZA3Q96KX2 299 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 ERGIC2Q96RQ1 377 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 TSGA10Q9BZW7 698 aa22.08■■□□□ 1.13
CCDC47-202ENST00000403162 RNF216Q9NWF9 866 aaPredicted RBP22.08■■□□□ 1.13
CCDC47-202ENST00000403162 INF2Q27J81 1249 aa22.08■■□□□ 1.12
CCDC47-202ENST00000403162 LRRC31Q6UY01 552 aa22.08■■□□□ 1.12
CCDC47-202ENST00000403162 PODNQ7Z5L7 613 aa22.08■■□□□ 1.12
CCDC47-202ENST00000403162 ZBTB9Q96C00 473 aa22.08■■□□□ 1.12
CCDC47-202ENST00000403162 CNOT6LQ96LI5 555 aaKnown RBP22.08■■□□□ 1.12
CCDC47-202ENST00000403162 IL17RBQ9NRM6 502 aa22.08■■□□□ 1.12
CCDC47-202ENST00000403162 VAV2P52735 878 aa22.07■■□□□ 1.12
CCDC47-202ENST00000403162 COBLL1Q53SF7 1204 aa22.07■■□□□ 1.12
CCDC47-202ENST00000403162 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
CCDC47-202ENST00000403162 LDHBP07195 334 aaKnown RBP22.06■■□□□ 1.12
CCDC47-202ENST00000403162 MIIPQ5JXC2 388 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 MFSD14BQ5SR56 506 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 DZIP1Q86YF9 867 aaKnown RBP22.06■■□□□ 1.12
CCDC47-202ENST00000403162 CAGE1Q8TC20 777 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 TRIM9Q9C026 710 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 BARHL2Q9NY43 387 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 STXBP3O00186 592 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 TRIM66O15016 1216 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 PLCG1P19174 1290 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 KLK7P49862 253 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 TFAP4Q01664 338 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 CCDC178Q5BJE1 867 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 ANKRD40Q6AI12 368 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 CCNI2Q6ZMN8 369 aaPredicted RBP22.06■■□□□ 1.12
CCDC47-202ENST00000403162 C10orf67Q8IYJ2 551 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 LARGE2Q8N3Y3 721 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 TBC1D22AQ8WUA7 517 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 RUBCNQ92622 972 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 PLIN2Q99541 437 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 C7orf25Q9BPX7 421 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 TAOK3Q9H2K8 898 aa22.06■■□□□ 1.12
CCDC47-202ENST00000403162 PDE2AO00408 941 aaPredicted RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 IDEP14735 1019 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 HNRNPH3P31942 346 aaKnown RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 KIF5AQ12840 1032 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 ZNF572Q7Z3I7 529 aaPredicted RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 CABP7Q86V35 215 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 SECISBP2LQ93073 1101 aaKnown RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 KCNQ5Q9NR82 932 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms