RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 SNX29Q8TEQ0 813 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 CCSER1Q9C0I3 900 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 THAP9Q9H5L6 903 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 HAUS4Q9H6D7 363 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 KRT86O43790 486 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 AKR1B10O60218 316 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 SV2BQ7L1I2 683 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 HDAC7Q8WUI4 952 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 NHSL1Q5SYE7 1610 aa18.97■□□□□ 0.63
SNRNP70-202ENST00000401730 NPHP3-ACAD11A0A0J9YXS1 232 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 MAP2K7O14733 419 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 CYLC1P35663 651 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 CACNB3P54284 484 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 TDRD12Q587J7 1177 aaKnown RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 MIIPQ5JXC2 388 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 TRAPPC3LQ5T215 181 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 DNAJC7Q99615 494 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 ZMYND12Q9H0C1 365 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 SH3GLB2Q9NR46 395 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 AKR1B1P15121 316 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 KIF5AQ12840 1032 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 GRAPQ13588 217 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 TMED8Q6PL24 325 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 COG1Q8WTW3 980 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 UBXN6Q9BZV1 441 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 GNA11P29992 359 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 EIF4A3P38919 411 aaKnown RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 GRB10Q13322 594 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 SPA17Q15506 151 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 DNAJC21Q5F1R6 531 aaKnown RBP18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
SNRNP70-202ENST00000401730 ECM1Q16610 540 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 TRAPPC11Q7Z392 1133 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 MSANTD4Q8NCY6 345 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 FGFBP2Q9BYJ0 223 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 LDHCP07864 332 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 KCNB1Q14721 858 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 NFRKBQ6P4R8 1299 aa18.95■□□□□ 0.62
SNRNP70-202ENST00000401730 ATP8B1O43520 1251 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 KRT83P78385 493 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 GSTO1P78417 241 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 DOK7Q18PE1 504 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 DHTKD1Q96HY7 919 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 IFIH1Q9BYX4 1025 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 BLOC1S4Q9NUP1 217 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 CWC15Q9P013 229 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 GFPT1Q06210 699 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 TTC19Q6DKK2 380 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 LEKR1Q6ZMV7 388 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 CACNA2D4Q7Z3S7 1137 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 RAB21Q9UL25 225 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 LRRC53A6NM62 1247 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 RASSF7Q02833 373 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 DDX12PQ92771 950 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 SECISBP2LQ93073 1101 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 PNMA5Q96PV4 448 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 NDST4Q9H3R1 872 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 ARHGAP20Q9P2F6 1191 aa18.94■□□□□ 0.62
SNRNP70-202ENST00000401730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L15C9J2P7 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L13C9JLJ4 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L11C9JVI0 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L18D6R9N7 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L22D6RA61 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L17D6RBQ6 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L19D6RCP7 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L20D6RJB6 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 FECHP22830 423 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 ZBED6P86452 979 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L24Q0WX57 530 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 TCP10Q12799 353 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L6PQ6QN14 398 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 LARP4BQ92615 738 aaKnown RBP18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 TSPYL1Q9H0U9 437 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 FAM204AQ9H8W3 233 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 POLLQ9UGP5 575 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 BICDL2A1A5D9 508 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 TRAF5O00463 557 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 EIF3JO75822 258 aaKnown RBP18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 SLC30A10Q6XR72 485 aa18.93■□□□□ 0.62
SNRNP70-202ENST00000401730 PDHBP11177 359 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 MS4A14Q96JA4 679 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 GGA1Q9UJY5 639 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 PACSIN2Q9UNF0 486 aaPredicted RBP18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 A0A1W2PQC6 194 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 E9PMD0 336 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 USP14P54578 494 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 PRR5LQ6MZQ0 368 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 PROCA1Q8NCQ7 364 aaPredicted RBP18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 NEDD1Q8NHV4 660 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 SALL4Q9UJQ4 1053 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms