RNA–Protein interactions for RNA: ENST00000401530.5

VIT-204, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-204ENST00000401530 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
VIT-204ENST00000401530 CLEC4DQ8WXI8 215 aa12.55□□□□□ -0.4
VIT-204ENST00000401530 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
VIT-204ENST00000401530 ZNF830Q96NB3 372 aaPredicted RBP12.55□□□□□ -0.4
VIT-204ENST00000401530 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
VIT-204ENST00000401530 CGNQ9P2M7 1197 aaKnown RBP12.55□□□□□ -0.4
VIT-204ENST00000401530 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
VIT-204ENST00000401530 COL11A1P12107 1806 aaPredicted RBP12.55□□□□□ -0.4
VIT-204ENST00000401530 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
VIT-204ENST00000401530 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
VIT-204ENST00000401530 NEMFO60524 1076 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 CFBP00751 764 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 STAT3P40763 770 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 PLS1Q14651 629 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
VIT-204ENST00000401530 INF2Q27J81 1249 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 SAMD3Q8N6K7 520 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 RCOR1Q9UKL0 485 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 SPDYE3A6NKU9 549 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 NFIBO00712 420 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 BMP15O95972 392 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 CBX1P83916 185 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 GHRHRQ02643 423 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 DDX19AQ9NUU7 478 aaKnown RBP12.54□□□□□ -0.4
VIT-204ENST00000401530 BTBD7Q9P203 1132 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
VIT-204ENST00000401530 RBBP6Q7Z6E9 1792 aaKnown RBP12.54□□□□□ -0.4
VIT-204ENST00000401530 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 HSD17B4P51659 736 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 TCHHQ07283 1943 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 SPTLC2O15270 562 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 CNMDO75829 334 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 COPB2P35606 906 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 JMYQ8N9B5 988 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 MAF1Q9H063 256 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 ACAD9Q9H845 621 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
VIT-204ENST00000401530 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
VIT-204ENST00000401530 CYP2C8P10632 490 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 CDC25BP30305 580 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 INHBEP58166 350 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.4
VIT-204ENST00000401530 PTPAQ15257 358 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 ZNF174Q15697 407 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 FCHSD1Q86WN1 690 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 TBC1D5Q92609 795 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 NAP1L4Q99733 375 aaKnown RBP12.52□□□□□ -0.4
VIT-204ENST00000401530 PTPN18Q99952 460 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 KCNF1Q9H3M0 494 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 RBPJLQ9UBG7 517 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 FBXO40Q9UH90 709 aa12.52□□□□□ -0.4
VIT-204ENST00000401530 WNT7AO00755 349 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 SLC25A27O95847 323 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 MCM7P33993 719 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 ME1P48163 572 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 GCLCP48506 637 aaPredicted RBP12.52□□□□□ -0.41
VIT-204ENST00000401530 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 LETM2Q2VYF4 491 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
VIT-204ENST00000401530 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
VIT-204ENST00000401530 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
VIT-204ENST00000401530 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 PPP6R2O75170 966 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 SREBF1P36956 1147 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 APLP1P51693 650 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
VIT-204ENST00000401530 MOV10L1Q9BXT6 1211 aaKnown RBP12.51□□□□□ -0.41
VIT-204ENST00000401530 TXNRD2Q9NNW7 524 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
VIT-204ENST00000401530 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
VIT-204ENST00000401530 GCFC2P16383 781 aaKnown RBP12.5□□□□□ -0.41
VIT-204ENST00000401530 USP11P51784 963 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms