RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SEPT9Q9UHD8 586 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 SRPRBQ9Y5M8 271 aaKnown RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 MYL7Q01449 175 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 EHHADHQ08426 723 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 SYNE4Q8N205 404 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 INPP5BP32019 993 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 VSIG1Q86XK7 387 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 GABPB2Q8TAK5 448 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-204ENST00000400337 TBC1D31Q96DN5 1066 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 HINFPQ9BQA5 517 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 PI4KBQ9UBF8 816 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 ATF7P17544 494 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-204ENST00000400337 CDK8P49336 464 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 CEP85LQ5SZL2 805 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 RIOK1Q9BRS2 568 aaKnown RBP19.91■□□□□ 0.78
COL18A1-204ENST00000400337 RGS16O15492 202 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-204ENST00000400337 CIB2O75838 187 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 STAM2O75886 525 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 ADCY8P40145 1251 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 UBE2SQ16763 222 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 AOC3Q16853 763 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 EPSTI1Q96J88 318 aa19.91■□□□□ 0.78
COL18A1-204ENST00000400337 PLEKHA8P1O95397 391 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 VPS52Q8N1B4 723 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 MGARPQ8TDB4 240 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 SAMSN1Q9NSI8 373 aaKnown RBP19.9■□□□□ 0.78
COL18A1-204ENST00000400337 KRT81Q14533 505 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 CTAGE3PQ8IX95 158 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 STAT2P52630 851 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 CACTINQ8WUQ7 758 aaKnown RBP19.9■□□□□ 0.78
COL18A1-204ENST00000400337 NSMCE1Q8WV22 266 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 ATP6V0A1Q93050 837 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 A2ML1A8K2U0 1454 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 HADHQ16836 314 aaKnown RBP19.9■□□□□ 0.78
COL18A1-204ENST00000400337 FAM160B1Q5W0V3 765 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 SLC35F6Q8N357 371 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 ANKRD42Q8N9B4 389 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 PPFIBP2Q8ND30 876 aa19.9■□□□□ 0.78
COL18A1-204ENST00000400337 ENC1O14682 589 aa19.89■□□□□ 0.78
COL18A1-204ENST00000400337 CYP2E1P05181 493 aaPredicted RBP19.89■□□□□ 0.78
COL18A1-204ENST00000400337 PPP2R5EQ16537 467 aa19.89■□□□□ 0.78
COL18A1-204ENST00000400337 GJB4Q9NTQ9 266 aa19.89■□□□□ 0.78
COL18A1-204ENST00000400337 STK17AQ9UEE5 414 aa19.89■□□□□ 0.78
COL18A1-204ENST00000400337 ZNF131P52739 623 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 FKBP3Q00688 224 aaKnown RBP19.89■□□□□ 0.77
COL18A1-204ENST00000400337 SYDE2Q5VT97 1194 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 MED10Q9BTT4 135 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 ANO3Q9BYT9 981 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 WDR11Q9BZH6 1224 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 ARHGAP31Q2M1Z3 1444 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 PIK3CAP42336 1068 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 NSFP46459 744 aaKnown RBP19.89■□□□□ 0.77
COL18A1-204ENST00000400337 TOB2Q14106 344 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-204ENST00000400337 KCTD2Q14681 263 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 NAA35Q5VZE5 725 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 RIC8AQ9NPQ8 531 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 PSMC2P35998 433 aaKnown RBP19.89■□□□□ 0.77
COL18A1-204ENST00000400337 FAM186BQ8IYM0 893 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 SEPT12Q8IYM1 358 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 CDC42BPGQ6DT37 1551 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 CLIC2O15247 247 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 GAP43P17677 238 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 TMOD1P28289 359 aa19.89■□□□□ 0.77
COL18A1-204ENST00000400337 MAN2A1Q16706 1144 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 PLCG1P19174 1290 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 GABPAQ06546 454 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 MIGA2Q7L4E1 593 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 PALM2Q8IXS6 379 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 HESX1Q9UBX0 185 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 CLTCL1P53675 1640 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 TBC1D10CQ8IV04 446 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 BRIP1Q9BX63 1249 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 BZW2Q9Y6E2 419 aaKnown RBP19.88■□□□□ 0.77
COL18A1-204ENST00000400337 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 IQGAP3Q86VI3 1631 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 AFPP02771 609 aaKnown RBP19.88■□□□□ 0.77
COL18A1-204ENST00000400337 USP14P54578 494 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 ATP11AP98196 1134 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 ENOX1Q8TC92 643 aaKnown RBP19.88■□□□□ 0.77
COL18A1-204ENST00000400337 GRK7Q8WTQ7 553 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 NT5C1BQ96P26 610 aa19.88■□□□□ 0.77
COL18A1-204ENST00000400337 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 PTK2Q05397 1052 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 NEDD9Q14511 834 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 SESTD1Q86VW0 696 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 I3L4J1 428 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 CAPN9O14815 690 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 GKAP1Q5VSY0 366 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-204ENST00000400337 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 PAGE5Q96GU1 130 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 NACC1Q96RE7 527 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 KRT12Q99456 494 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 MYL1P05976 194 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 MFAP3P55082 362 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 PPP2R5CQ13362 524 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 CDC37Q16543 378 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-204ENST00000400337 RWDD2AQ9UIY3 292 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms