RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MAGI3Q5TCQ9 1506 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 HIP1RO75146 1068 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 BRD1O95696 1058 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 BAG2O95816 211 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ZMYND10O75800 440 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 TNNI3KQ59H18 835 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 PCDHB4Q9Y5E5 795 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 SYT1P21579 422 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP5DP30049 168 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 APOBEC3FQ8IUX4 373 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 DDX25Q9UHL0 483 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 I3L4J1 428 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 LONRF3Q496Y0 759 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 TRIM31Q9BZY9 425 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 LUC7L2Q9Y383 392 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 CPB1P15086 417 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 GBP1P32455 592 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ZAP70P43403 619 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 PTK2BQ14289 1009 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 CREB3L3Q68CJ9 461 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 RAPH1Q70E73 1250 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 VPS37BQ9H9H4 285 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 APOEP02649 317 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 YY1P25490 414 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 PPP1R2P41236 205 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 DHX32Q7L7V1 743 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 VPS16Q9H269 839 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 UTP11Q9Y3A2 253 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 VEPH1Q14D04 833 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 AOC3Q16853 763 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 KAZNQ674X7 775 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 RSPH10B2B2RC85 870 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 RSPH10BP0C881 870 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 SETSIPP0DME0 302 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 ACTN1P12814 892 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 CHRNDQ07001 517 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 FBXW10Q5XX13 1052 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 SYTL2Q9HCH5 934 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 TSPY1Q01534 308 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 PPARAQ07869 468 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 USP17L21D6R901 530 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 TUBB2AQ13885 445 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 GAS2L3Q86XJ1 694 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 SNX19Q92543 992 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 ZFYVE19Q96K21 471 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 RILPQ96NA2 401 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
CACNA1C-216ENST00000399638 LAMC1P11047 1609 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 DDAH1O94760 285 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 APPBP2Q92624 585 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 VAMP4O75379 141 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 STAT2P52630 851 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 HIF1AQ16665 826 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 ANGPTL8Q6UXH0 198 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 CACNA2D3Q8IZS8 1091 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 H7C0C1 242 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP5OP48047 213 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 PDE6CP51160 858 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 TYRO3Q06418 890 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 SDR42E1Q8WUS8 393 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 KRT12Q99456 494 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 AK2P54819 239 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms