RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
COL25A1-202ENST00000399127 RASSF7Q02833 373 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 CXCL9Q07325 125 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 PDE4DQ08499 809 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 GRB10Q13322 594 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 MTF1Q14872 753 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 TMEM179Q6ZVK1 233 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 MKL1Q969V6 931 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
COL25A1-202ENST00000399127 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 MARCH6O60337 910 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 NDUFB10O96000 172 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 STK4Q13043 487 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 MCM6Q14566 821 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 TMEM266Q2M3C6 531 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 PPP1R18Q6NYC8 613 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 GIMAP8Q8ND71 665 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 KIF18AQ8NI77 898 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 CDK5RAP3Q96JB5 506 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 MYH7BA7E2Y1 1941 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 NFKBIEO00221 500 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 TULP2O00295 520 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 CASP14P31944 242 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 KCNJ6P48051 423 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 KCNB1Q14721 858 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 RBM26Q5T8P6 1007 aaKnown RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
COL25A1-202ENST00000399127 SCAF8Q9UPN6 1271 aaKnown RBP13.18□□□□□ -0.3
COL25A1-202ENST00000399127 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 PBX1P40424 430 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 HAS1Q92839 578 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SRRTQ9BXP5 876 aaKnown RBP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 VPS33BQ9H267 617 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 CUEDC2Q9H467 287 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 VEZTQ9HBM0 779 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 PPP2R2CQ9Y2T4 447 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 PSMA7O14818 248 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 CLGNO14967 610 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 ECE1P42892 770 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 LIMA1Q9UHB6 759 aaKnown RBP13.17□□□□□ -0.3
COL25A1-202ENST00000399127 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
COL25A1-202ENST00000399127 CTIFO43310 598 aaKnown RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 STX10O60499 249 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 ENTPD3O75355 529 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 GYPCP04921 128 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 MYL1P05976 194 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 ORC2Q13416 577 aaPredicted RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 STIM1Q13586 685 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 ECM1Q16610 540 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 DNAI1Q9UI46 699 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 MYMKA6NI61 221 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 UBXN1Q04323 297 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 GMLQ99445 158 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 RAB34Q9BZG1 259 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms