RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 UNC13DQ70J99 1090 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 EIF3CQ99613 913 aaKnown RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 BIN2Q9UBW5 565 aaPredicted RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 USP21Q9UK80 565 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 DAGLAQ9Y4D2 1042 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 KRT86O43790 486 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 GYS1P13807 737 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 CAPN2P17655 700 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 HNRNPH3P31942 346 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 PNKPQ96T60 521 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 FGFR1OPO95684 399 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 SERPINB2P05120 415 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 FCER1AP12319 257 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 PNMA5Q96PV4 448 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
C4orf3-201ENST00000399075 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
C4orf3-201ENST00000399075 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 IPO7O95373 1038 aaKnown RBP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 CCDC122Q5T0U0 273 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 WDR93Q6P2C0 686 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 HDXQ7Z353 690 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 LARP4BQ92615 738 aaKnown RBP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 RPGRIP1Q96KN7 1286 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 SEMA6BQ9H3T3 888 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 SWAP70Q9UH65 585 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 TXKP42681 527 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 LRRC63Q05C16 580 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 JAKMIP2Q96AA8 810 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 NHEJ1Q9H9Q4 299 aaPredicted RBP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 RIC8AQ9NPQ8 531 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.68□□□□□ -0.38
C4orf3-201ENST00000399075 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
C4orf3-201ENST00000399075 PNMA6FA0A0J9YX94 578 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 MYMKA6NI61 221 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 EDIL3O43854 480 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 EHHADHQ08426 723 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 PSMD2Q13200 908 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 RAD54LQ92698 747 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 TRIM10Q9UDY6 481 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 SLC37A4O43826 429 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 TTLL1O95922 423 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 SEPT2Q15019 361 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 COA1Q9GZY4 146 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 SAR1BQ9Y6B6 198 aa12.67□□□□□ -0.38
C4orf3-201ENST00000399075 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 SLC26A4O43511 780 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 CKAP4Q07065 602 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 GPS2Q13227 327 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 MAN2A1Q16706 1144 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 EIF3JO75822 258 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 AKR1B1P15121 316 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 GCFC2P16383 781 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 MCM3P25205 808 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 VAV2P52735 878 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 MCM6Q14566 821 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 TDP2O95551 362 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms