RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PRPHP41219 470 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 RESP18Q5W5W9 173 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 DENND2CQ68D51 928 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 STMN2Q93045 179 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 CPVLQ9H3G5 476 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 ZRANB2O95218 330 aaKnown RBP eCLIP16.04■□□□□ 0.168e-11■■■□□ 17.7
RPRD1A-202ENST00000399022 CETN1Q12798 172 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 MYO1FO00160 1098 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 KRIT1O00522 736 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 PPP1R2P41236 205 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 ANTXR2P58335 489 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 SFMBT2Q5VUG0 894 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 EHMT1Q9H9B1 1298 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 SRPRBQ9Y5M8 271 aaKnown RBP16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 ASIC2Q16515 512 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 TAOK1Q7L7X3 1001 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 HNRNPLLQ8WVV9 542 aaKnown RBP16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 SLC39A2Q9NP94 309 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 GUCY1A3Q02108 690 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 SHC4Q6S5L8 630 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 TBC1D5Q92609 795 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 LRRD1A4D1F6 860 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 FAM13AO94988 1023 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 PLVAPQ9BX97 442 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 MINPP1Q9UNW1 487 aa16.03■□□□□ 0.16
RPRD1A-202ENST00000399022 PTPREP23469 700 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 ST3GAL1Q11201 340 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 MYO1EQ12965 1108 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 STXBP4Q6ZWJ1 553 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 KLHL29Q96CT2 875 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 OR52Z1P0C646 297 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
RPRD1A-202ENST00000399022 ESYT3A0FGR9 886 aa16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 CPDO75976 1380 aa16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 ADAT2Q7Z6V5 191 aaKnown RBP16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 KIAA0825Q8IV33 1275 aa16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 SPDL1Q96EA4 605 aa16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 LZTS2Q9BRK4 669 aa16.02■□□□□ 0.15
RPRD1A-202ENST00000399022 EIF3HO15372 352 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 INTS9Q9NV88 658 aaKnown RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 BSDC1Q9NW68 430 aaPredicted RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 ZNF131P52739 623 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 MUM1Q2TAK8 710 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 NAA35Q5VZE5 725 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 YIPF3Q9GZM5 350 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 HPCAL4Q9UM19 191 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 TULP2O00295 520 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 SLC44A5Q8NCS7 719 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 FTCDO95954 541 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 CSF1RP07333 972 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 SESN3P58005 492 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPRD1A-202ENST00000399022 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 HS2ST1Q7LGA3 356 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 KSR1Q8IVT5 923 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 PARP9Q8IXQ6 854 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 KCNB2Q92953 911 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 MEGF6O75095 1541 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 RICTORQ6R327 1708 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 HMGB1P1B2RPK0 211 aaPredicted RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.153e-12■■■■■ 52.5
RPRD1A-202ENST00000399022 NLRP14Q86W24 1093 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 PAGE5Q96GU1 130 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16■□□□□ 0.15
RPRD1A-202ENST00000399022 KLHL14Q9P2G3 628 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 UBE2Q2LH0YL09 131 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 LUC7L3O95232 432 aaKnown RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 MRRFQ96E11 262 aaKnown RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 CNOT6LQ96LI5 555 aaKnown RBP16■□□□□ 0.15
RPRD1A-202ENST00000399022 CD248Q9HCU0 757 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 HOMER3Q9NSC5 361 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms