RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 RABEP2Q9H5N1 569 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 TTC41PQ6P2S7 1318 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 POMCP01189 267 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 P4HBP07237 508 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 UBXN1Q04323 297 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 TRIM48Q8IWZ4 208 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PHKBQ93100 1093 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 FAM167AQ96KS9 214 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 YIPF2Q9BWQ6 316 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 NCKAP5LQ9HCH0 1330 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 CTAGE15A4D2H0 777 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 ALDH1A3P47895 512 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 UBE2HP62256 183 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 GTF2IP78347 998 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 COG7P83436 770 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 MAP3K10Q02779 954 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PTK2Q05397 1052 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 JADE1Q6IE81 842 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 CPLX4Q7Z7G2 160 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 USHBP1Q8N6Y0 703 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PDCD7Q8N8D1 485 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 MIGA1Q8NAN2 632 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 AFAP1L1Q8TED9 768 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 DDX25Q9UHL0 483 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 CCDC78A2IDD5 438 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 DDX39AO00148 427 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 HSPA6P17066 643 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 RAP1GDS1P52306 607 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 LAMB3Q13751 1172 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 KANK4Q5T7N3 995 aaPredicted RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 IER5Q5VY09 327 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 RELL1Q8IUW5 271 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 IFT20Q8IY31 132 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 GAS2L1Q99501 681 aaPredicted RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 AATFQ9NY61 560 aaKnown RBP eCLIP5.44□□□□□ -1.54
TTC3-204ENST00000399017 PCDHB7Q9Y5E2 793 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 NUP160Q12769 1436 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PPEF1O14829 653 aaPredicted RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 TBC1D8O95759 1140 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 ATP1A1P05023 1023 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 STAG3L1P0CL83 205 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PIK3CAP42336 1068 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 AFMP43652 599 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 BFSP1Q12934 665 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 TRIP4Q15650 581 aaPredicted RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 ACCSLQ4AC99 568 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 CIAPIN1Q6FI81 312 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 PRPF40BQ6NWY9 871 aaKnown RBP5.44□□□□□ -1.54
TTC3-204ENST00000399017 SEPT14Q6ZU15 432 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 SENP1Q9P0U3 644 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 SHROOM2Q13796 1616 aa5.44□□□□□ -1.54
TTC3-204ENST00000399017 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 HPDP32754 393 aaPredicted RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 STAT1P42224 750 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 GLE1Q53GS7 698 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 ANKS6Q68DC2 871 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 KRBA2Q6ZNG9 492 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 FAM178BQ8IXR5 827 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 FGD4Q96M96 766 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 SMARCAD1Q9H4L7 1026 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 BICC1Q9H694 974 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 SMARCAL1Q9NZC9 954 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 MYH2Q9UKX2 1941 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 MYH15Q9Y2K3 1946 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 BRAFP15056 766 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 HNRNPH1P31943 449 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 MMP14P50281 582 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 ZNF157P51786 506 aaPredicted RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 MECOMQ03112 1051 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 TNFAIP2Q03169 654 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 TWF2Q6IBS0 349 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 MMS22LQ6ZRQ5 1243 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 TRMT44Q8IYL2 757 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 ARFGAP3Q9NP61 516 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 PI4KBQ9UBF8 816 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 TSKSQ9UJT2 592 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 MAP2P11137 1827 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 IRX5P78411 483 aaPredicted RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 IL1RL1Q01638 556 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 SCYL2Q6P3W7 929 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 PPP1R12CQ9BZL4 782 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 SAE1Q9UBE0 346 aaPredicted RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 SAP30BPQ9UHR5 308 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 GRIN2AQ12879 1464 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 ANKRD36BQ8N2N9 1353 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 CCDC88AQ3V6T2 1871 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 BMP10O95393 424 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 RALAP11233 206 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 ALAS1P13196 640 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 SOX5P35711 763 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 BCAMP50895 628 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 RASSF7Q02833 373 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 THOC5Q13769 683 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 FBXO11Q86XK2 927 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 ASIC4Q96FT7 647 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 XPO6Q96QU8 1125 aaKnown RBP5.43□□□□□ -1.54
TTC3-204ENST00000399017 USP40Q9NVE5 1235 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 BIVM-ERCC5R4GMW8 1640 aa5.43□□□□□ -1.54
TTC3-204ENST00000399017 AP3B1O00203 1094 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms