RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 PPP1R13LQ8WUF5 828 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 RRP15Q9Y3B9 282 aaKnown RBP14.77□□□□□ -0.05
TOP3B-202ENST00000398793 BECN2A8MW95 431 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 CLCN6P51797 869 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.05
TOP3B-202ENST00000398793 NONOQ15233 471 aaKnown RBP eCLIP14.77□□□□□ -0.05
TOP3B-202ENST00000398793 IL17AQ16552 155 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 DPCR1Q3MIW9 517 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
TOP3B-202ENST00000398793 RIPK3Q9Y572 518 aa14.77□□□□□ -0.05
TOP3B-202ENST00000398793 NRXN2Q9P2S2 1712 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 PNMA6FA0A0J9YX94 578 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 USP27XA6NNY8 438 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 IRF6O14896 467 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 TTC31Q49AM3 519 aaPredicted RBP14.76□□□□□ -0.05
TOP3B-202ENST00000398793 SRLQ86TD4 932 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 FUCA2Q9BTY2 467 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
TOP3B-202ENST00000398793 GOPCQ9HD26 462 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 IDEP14735 1019 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 FAM160A1Q05DH4 1040 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 E2F4Q16254 413 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
TOP3B-202ENST00000398793 HTTP42858 3142 aa14.76□□□□□ -0.05
TOP3B-202ENST00000398793 SPDYE3A6NKU9 549 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 VCAM1P19320 739 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 ADALQ6DHV7 355 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 NOC3LQ8WTT2 800 aaKnown RBP14.75□□□□□ -0.05
TOP3B-202ENST00000398793 CACTINQ8WUQ7 758 aaKnown RBP14.75□□□□□ -0.05
TOP3B-202ENST00000398793 DEF6Q9H4E7 631 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 POLR3EQ9NVU0 708 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 IGKV6D-41A0A0C4DH26 115 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 UBA7P41226 1012 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 ZNF165P49910 485 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 TREML2Q5T2D2 321 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 AOPEPQ8N6M6 819 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 CCDC148Q8NFR7 591 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 DPF2Q92785 391 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 NUDT12Q9BQG2 462 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 ZCCHC17Q9NP64 241 aaKnown RBP14.75□□□□□ -0.05
TOP3B-202ENST00000398793 TCP11L1Q9NUJ3 509 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 PPP1R12BO60237 982 aaPredicted RBP14.75□□□□□ -0.05
TOP3B-202ENST00000398793 GNA11P29992 359 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 GPATCH4Q5T3I0 446 aaKnown RBP14.75□□□□□ -0.05
TOP3B-202ENST00000398793 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 VCPKMTQ9H867 229 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 NYAP2Q9P242 653 aa14.75□□□□□ -0.05
TOP3B-202ENST00000398793 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 CUL5Q93034 780 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 AMNQ9BXJ7 453 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 EHD4Q9H223 541 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 EMILIN3Q9NT22 766 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 SAMM50Q9Y512 469 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 CSADQ9Y600 493 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 ROBO3Q96MS0 1386 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 DDX60LQ5H9U9 1706 aaKnown RBP14.74□□□□□ -0.05
TOP3B-202ENST00000398793 ZBTB39O15060 712 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 NEMFO60524 1076 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 CYP2C8P10632 490 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 CCDC178Q5BJE1 867 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
TOP3B-202ENST00000398793 PCDHA5Q9Y5H7 936 aa14.74□□□□□ -0.05
TOP3B-202ENST00000398793 ABCB11O95342 1321 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
TOP3B-202ENST00000398793 NCAPH2Q6IBW4 605 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 ADARB2Q9NS39 739 aaKnown RBP14.73□□□□□ -0.05
TOP3B-202ENST00000398793 H2AFXP16104 143 aaPredicted RBP14.73□□□□□ -0.05
TOP3B-202ENST00000398793 PTPRAP18433 802 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 NEK8Q86SG6 692 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 PACS2Q86VP3 889 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 FAM200AQ8TCP9 573 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 SPZ1Q9BXG8 430 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 RIOX1Q9H6W3 641 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 TMX2Q9Y320 296 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 STK36Q9NRP7 1315 aa14.73□□□□□ -0.05
TOP3B-202ENST00000398793 TESPA1A2RU30 521 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 FMR1NBQ8N0W7 255 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 BCAS3Q9H6U6 928 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 USP2O75604 605 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 YEATS4O95619 227 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 CALCRLQ16602 461 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 TMCO3Q6UWJ1 677 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 MYCP01106 439 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 LMAN1P49257 510 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 FKBP1AP62942 108 aaKnown RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 ARHGAP29Q52LW3 1261 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 SNRNP48Q6IEG0 339 aaKnown RBP14.72□□□□□ -0.05
TOP3B-202ENST00000398793 NCAPG2Q86XI2 1143 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 ZNF280CQ8ND82 737 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 CDCA5Q96FF9 252 aa14.72□□□□□ -0.05
TOP3B-202ENST00000398793 CBX8Q9HC52 389 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms