RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 RBM8AQ9Y5S9 174 aaKnown RBP7.44□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TRANK1O15050 2925 aa7.44□□□□□ -1.22
SMARCE1P6-201ENST00000398372 UQCRHLA0A096LP55 91 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TULP2O00295 520 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 WDR46O15213 610 aaKnown RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 UQCRHP07919 91 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CYBAP13498 195 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CASTP20810 708 aaKnown RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PDCP20941 246 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PTPREP23469 700 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NHLH1Q02575 133 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FPGSQ05932 587 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MCM6Q14566 821 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MCMDC2Q4G0Z9 681 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PRAMEF19Q5SWL8 479 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MFSD14CQ5VZR4 134 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CREB3L3Q68CJ9 461 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MICALL1Q8N3F8 863 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ANKS1AQ92625 1134 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ATG4CQ96DT6 458 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TIGD1Q96MW7 591 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 JAKMIP1Q96N16 626 aaKnown RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 DSCC1Q9BVC3 393 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NACAP1Q9BZK3 213 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NOL7Q9UMY1 257 aaKnown RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SMC3Q9UQE7 1217 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 YBX2Q9Y2T7 364 aaKnown RBP7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 LRRC37A2A6NM11 1700 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ROBO3Q96MS0 1386 aa7.43□□□□□ -1.22
SMARCE1P6-201ENST00000398372 A0A0G2JMZ2 1700 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 IGKV6D-41A0A0C4DH26 115 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SLC15A5A6NIM6 579 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SLC27A2O14975 620 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 STX6O43752 255 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PRDM1O75626 825 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FLOT1O75955 427 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CLTBP09497 229 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZSCAN22P10073 491 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RAG1P15918 1043 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PTH1RQ03431 593 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PPARAQ07869 468 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PKP1Q13835 747 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PLS1Q14651 629 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 LRRC41Q15345 812 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RASIP1Q5U651 963 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 BLOC1S2Q6QNY1 142 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PLPP6Q8IY26 295 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ARRDC4Q8NCT1 418 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PHOX2BQ99453 314 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MOV10L1Q9BXT6 1211 aaKnown RBP7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SPATC1LQ9H0A9 340 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NAPBQ9H115 298 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 GZF1Q9H116 711 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZNF287Q9HBT7 754 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RBM28Q9NW13 759 aaKnown RBP7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NYAP2Q9P242 653 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CLIP2Q9UDT6 1046 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TACC3Q9Y6A5 838 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
SMARCE1P6-201ENST00000398372 A0A0D9SFI3 127 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 KBTBD13C9JR72 458 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PI4K2BG5E9Z4 385 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RFXAPO00287 272 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FOXP2O15409 715 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MSCO60682 206 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PQBP1O60828 265 aaKnown RBP7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 F13A1P00488 732 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MYOGP15173 224 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ERCC3P19447 782 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RPS6KB1P23443 525 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 IRX5P78411 483 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PDE4BQ07343 736 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 GRB14Q14449 540 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZSCAN23Q3MJ62 389 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FAM47AQ5JRC9 791 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FAM83BQ5T0W9 1011 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 KRT40Q6A162 431 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NCAPG2Q86XI2 1143 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FBXL16Q8N461 479 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MB21D1Q8N884 522 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CEP95Q96GE4 821 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FAM227BQ96M60 508 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NUP88Q99567 741 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 BRMS1Q9HCU9 246 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 GPCPD1Q9NPB8 672 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 INCENPQ9NQS7 918 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ADAMTS5Q9UNA0 930 aa7.41□□□□□ -1.22
SMARCE1P6-201ENST00000398372 F5H6K3 240 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 STRNO43815 780 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms