RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TSPAN17Q96FV3 270 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 ANTXR1Q9H6X2 564 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 BRMS1Q9HCU9 246 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 GINM1Q9NU53 330 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 A0A1W2PQ27 194 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 A0A1W2PQ64 194 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 A0A1W2PQC6 194 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 A0A1W2PQD8 194 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 LOC105371045A0A1W2PR82 267 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 MROH6A6NGR9 719 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 H0Y8X5 98 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 PPP1R11O60927 126 aaPredicted RBP4.29□□□□□ -1.72
CD47-203ENST00000398258 ATE1O95260 518 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 MCM4P33991 863 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 THBS2P35442 1172 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 CHMP4BP1P59074 171 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 CACNB2Q08289 660 aaPredicted RBP4.29□□□□□ -1.72
CD47-203ENST00000398258 SOGA3Q5TF21 947 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 NBPF6Q5VWK0 638 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 HLA-DQA1Q5Y7H0 255 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 MCTP2Q6DN12 878 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 USP51Q70EK9 711 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 CPA5Q8WXQ8 436 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 NBPF4Q96M43 638 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 PTPN18Q99952 460 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 HIRIP3Q9BW71 556 aaPredicted RBP4.29□□□□□ -1.72
CD47-203ENST00000398258 CNNM2Q9H8M5 875 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 EHMT1Q9H9B1 1298 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 EFR3BQ9Y2G0 817 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 PCDHB14Q9Y5E9 798 aa4.29□□□□□ -1.72
CD47-203ENST00000398258 CLEC3AO75596 197 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 ENDOUP21128 410 aaKnown RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 RPL13P26373 211 aaKnown RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 NASPP49321 788 aaPredicted RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 PRR31Q5SQ13 230 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 GK5Q6ZS86 529 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 TTLL7Q6ZT98 887 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 STK32CQ86UX6 486 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 JAMLQ86YT9 394 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 NAT16Q8N8M0 369 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 RBBP8NLQ8NC74 664 aaPredicted RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 NKD1Q969G9 470 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD47-203ENST00000398258 SRRTQ9BXP5 876 aaKnown RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 GMIPQ9P107 970 aa4.28□□□□□ -1.72
CD47-203ENST00000398258 DBR1Q9UK59 544 aaKnown RBP4.28□□□□□ -1.72
CD47-203ENST00000398258 PCSK5Q92824 1860 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 C9IYK1 514 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 CLCQ05315 142 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 AUHQ13825 339 aaKnown RBP4.27□□□□□ -1.73
CD47-203ENST00000398258 FHL2Q14192 279 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 FAM26EQ8N5C1 309 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 TXNDC5Q8NBS9 432 aaKnown RBP4.27□□□□□ -1.73
CD47-203ENST00000398258 SHDQ96IW2 340 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 C11orf84Q9BUA3 381 aaPredicted RBP4.27□□□□□ -1.73
CD47-203ENST00000398258 MKRN2Q9H000 416 aaKnown RBP4.27□□□□□ -1.73
CD47-203ENST00000398258 FBXL21Q9UKT6 434 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 ZNRF3Q9ULT6 936 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 PCDHB12Q9Y5F1 795 aa4.27□□□□□ -1.73
CD47-203ENST00000398258 NPIPB8E9PQR5 432 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 LAMTOR5O43504 91 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 GSNP06396 782 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 IMPDH2P12268 514 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 IFNGR1P15260 489 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 GIPRP48546 466 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 ZNF165P49910 485 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 ATXN1P54253 815 aaKnown RBP4.26□□□□□ -1.73
CD47-203ENST00000398258 SERINC3Q13530 473 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 SMN1Q16637 294 aaKnown RBP4.26□□□□□ -1.73
CD47-203ENST00000398258 FAM26FQ5R3K3 315 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 NLGN2Q8NFZ4 835 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 IGDCC4Q8TDY8 1250 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 MBD6Q96DN6 1003 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 CHFRQ96EP1 664 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 SLC6A18Q96N87 628 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 FCRL3Q96P31 734 aaPredicted RBP4.26□□□□□ -1.73
CD47-203ENST00000398258 ZNF408Q9H9D4 720 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 SIT1Q9Y3P8 196 aa4.26□□□□□ -1.73
CD47-203ENST00000398258 A0A1W2PQJ5 194 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 MEIS3P2A8K0S8 358 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 KLF4O43474 513 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 STK10O94804 968 aaKnown RBP4.25□□□□□ -1.73
CD47-203ENST00000398258 GTF2F1P35269 517 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD47-203ENST00000398258 CORO7P57737 925 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 KIAA2012Q0VF49 1180 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 MLECQ14165 292 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 DPH6Q7L8W6 267 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 OR6P1Q8NGX9 317 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 PTCHD1Q96NR3 888 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 IKZF4Q9H2S9 585 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 PPP1R1BQ9UD71 204 aaPredicted RBP4.25□□□□□ -1.73
CD47-203ENST00000398258 PRKAG3Q9UGI9 489 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 PPT2Q9UMR5 302 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 RWDD3Q9Y3V2 267 aa4.25□□□□□ -1.73
CD47-203ENST00000398258 SHROOM4Q9ULL8 1493 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 PATE3B3GLJ2 98 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 DDX3XO00571 662 aaKnown RBP eCLIP4.24□□□□□ -1.73
CD47-203ENST00000398258 SMARCA5O60264 1052 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms