RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GOLGA1Q92805 767 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PARD6BQ9BYG5 372 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CDC23Q9UJX2 597 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CAPN11Q9UMQ6 739 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ADAMTSL1Q8N6G6 1762 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 BICDL2A1A5D9 508 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CDK5RAP3Q96JB5 506 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 DNAJC7Q99615 494 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SEMA6BQ9H3T3 888 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PNMA6FA0A0J9YX94 578 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 FAM196BA6NMK8 535 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TRIM21P19474 475 aaKnown RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 MTIF2P46199 727 aaKnown RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CACNB3P54284 484 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 NOC3LQ8WTT2 800 aaKnown RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 GUCA1BQ9UMX6 200 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RASSF10A6NK89 507 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 G3V3G9 751 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 FXR2P51116 673 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 DCAF8Q5TAQ9 597 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 APOBEC3HQ6NTF7 200 aaKnown RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CNNM4Q6P4Q7 775 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SRGAP1Q7Z6B7 1085 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 LARP4BQ92615 738 aaKnown RBP20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 YY1AP1Q9H869 796 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SUGT1Q9Y2Z0 365 aa20.47■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ORC2Q13416 577 aaPredicted RBP20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TMEM266Q2M3C6 531 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KCNK18Q7Z418 384 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SNX29Q8TEQ0 813 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RABGGTAQ92696 567 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PCMTD1Q96MG8 357 aaPredicted RBP20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TSR1Q2NL82 804 aaKnown RBP20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 MIIPQ5JXC2 388 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RIC8AQ9NPQ8 531 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SWAP70Q9UH65 585 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ANKRD31Q8N7Z5 1873 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 IDEP14735 1019 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TCP10Q12799 353 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 GEMIN8Q9NWZ8 242 aaKnown RBP20.46■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ERCC3P19447 782 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HSPA1LP34931 641 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PLA2G4AP47712 749 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 TEKT1Q969V4 418 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NAPGQ99747 312 aaPredicted RBP20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 TTYH3Q9C0H2 523 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ECM1Q16610 540 aa20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CC2D1AQ6P1N0 951 aaPredicted RBP20.45■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HLA-DOAP06340 250 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 KRT79Q5XKE5 535 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 KRT27Q7Z3Y8 459 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 STK17AQ9UEE5 414 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 DDX25Q9UHL0 483 aaKnown RBP20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 SASH3O75995 380 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HERVK_113P62684 666 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 UNC13DQ70J99 1090 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CUL5Q93034 780 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RASSF4Q9H2L5 321 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 DNAJC18Q9H819 358 aa20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
CHRFAM7A-202ENST00000397827 LOC102724159A0A0B4J2E5 919 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZBTB5O15062 677 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 NPR1P16066 1061 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 BRD2P25440 801 aaKnown RBP20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CLK2P49760 499 aaKnown RBP20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PWP2Q15269 919 aaKnown RBP20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CENPPQ6IPU0 288 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RAD54LQ92698 747 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 HAS1Q92839 578 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 RAB34Q9BZG1 259 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CRKP46108 304 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PDIA5Q14554 519 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 LRRC41Q15345 812 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 CEP112Q8N8E3 955 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 DDX12PQ92771 950 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 PSTPIP2Q9H939 334 aa20.43■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L15C9J2P7 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L13C9JLJ4 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L11C9JVI0 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L18D6R9N7 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L22D6RA61 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L17D6RBQ6 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L19D6RCP7 530 aa20.42■□□□□ 0.86
CHRFAM7A-202ENST00000397827 USP17L20D6RJB6 530 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms