RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 OR52Z1P0C646 297 aa22.11■■□□□ 1.13
PDLIM2-205ENST00000397761 PFKFB1P16118 471 aa22.11■■□□□ 1.13
PDLIM2-205ENST00000397761 NDUFA8P51970 172 aa22.11■■□□□ 1.13
PDLIM2-205ENST00000397761 HUNKP57058 714 aa22.11■■□□□ 1.13
PDLIM2-205ENST00000397761 CSRNP2Q9H175 543 aa22.11■■□□□ 1.13
PDLIM2-205ENST00000397761 SLC37A4O43826 429 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 OSBPP22059 807 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 ZSCAN23Q3MJ62 389 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 GZF1Q9H116 711 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 BTBD7Q9P203 1132 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 COL20A1Q9P218 1284 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 KIAA1217Q5T5P2 1943 aa22.1■■□□□ 1.13
PDLIM2-205ENST00000397761 CNMDO75829 334 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 LONP1P36776 959 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 ANKRD23Q86SG2 305 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 SAPCD2Q86UD0 394 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 FCHSD1Q86WN1 690 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 POTEDQ86YR6 584 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 RIOX2Q8IUF8 465 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 SYTL5Q8TDW5 730 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 BRI3BPQ8WY22 251 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 CLSTN2Q9H4D0 955 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 EHMT1Q9H9B1 1298 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 HOMER2Q9NSB8 354 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 RABGAP1Q9Y3P9 1069 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 CCL15-CCL14A0A0B4J2E2 113 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 VWA3AA6NCI4 1184 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 RPS6P62753 249 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 CCL15Q16663 113 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 Q4G0T1 1027 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.09■■□□□ 1.135e-6■■■□□ 17.2
PDLIM2-205ENST00000397761 CHST13Q8NET6 341 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 GTF3C2Q8WUA4 911 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 ACAD9Q9H845 621 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 DDX25Q9UHL0 483 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 PNMA3Q9UL41 463 aa22.09■■□□□ 1.13
PDLIM2-205ENST00000397761 TESPA1A2RU30 521 aaPredicted RBP22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 ZNF445P59923 1031 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 DTHD1Q6ZMT9 781 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 RNF207Q6ZRF8 634 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 RBM43Q6ZSC3 357 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 RASAL3Q86YV0 1011 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 LENG9Q96B70 501 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 TIGD1Q96MW7 591 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 SPATC1LQ9H0A9 340 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 RBPJLQ9UBG7 517 aa22.08■■□□□ 1.12
PDLIM2-205ENST00000397761 BTBD19C9JJ37 291 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 CALCRLQ16602 461 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 USP49Q70CQ1 688 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 NUP62CLQ9H1M0 184 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 KCNMB3Q9NPA1 279 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 FAM13BQ9NYF5 915 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 KCNH3Q9ULD8 1083 aa22.07■■□□□ 1.12
PDLIM2-205ENST00000397761 IGLV3-22A0A075B6J6 115 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 FAM86B1E9PN63 330 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 TBX3O15119 743 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 KINO60870 393 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 ZNF202O95125 648 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 LETM1O95202 739 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 FAM86B2P0C5J1 330 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 SYKP43405 635 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 FXR2P51116 673 aaKnown RBP eCLIP22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 PLS1Q14651 629 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 SPECC1Q5M775 1068 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 SLC30A10Q6XR72 485 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 HAS1Q92839 578 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 AK8Q96MA6 479 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 FBXO40Q9UH90 709 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 TLL2Q9Y6L7 1015 aa22.06■■□□□ 1.12
PDLIM2-205ENST00000397761 COPB2P35606 906 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 RGMBQ6NW40 437 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 IGSF22Q8N9C0 903 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 SYMPKQ92797 1274 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 EPSTI1Q96J88 318 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 TXNRD2Q9NNW7 524 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 A1CFQ9NQ94 594 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 LRRC37A2A6NM11 1700 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 PLXNB2O15031 1838 aa22.05■■□□□ 1.12
PDLIM2-205ENST00000397761 PDHXO00330 501 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 BAATQ14032 418 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 NSMFQ6X4W1 530 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 ETNPPLQ8TBG4 499 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 MOV10L1Q9BXT6 1211 aaKnown RBP22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 CYP39A1Q9NYL5 469 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 PLXNA1Q9UIW2 1896 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 WDR81Q562E7 1941 aa22.04■■□□□ 1.12
PDLIM2-205ENST00000397761 CTAGE5O15320 804 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 SLC25A27O95847 323 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 ZNF157P51786 506 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 MKRN3Q13064 507 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PDIA5Q14554 519 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PCNX4Q63HM2 1172 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 ELOA2Q8IYF1 753 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 HHIPL1Q96JK4 782 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 TAAR1Q96RJ0 339 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PTPN18Q99952 460 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 CCSER1Q9C0I3 900 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PFASO15067 1338 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 SYCE3A1L190 88 aa22.03■■□□□ 1.12
PDLIM2-205ENST00000397761 PEX10O60683 326 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms