RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MB21D1Q8N884 522 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 C4orf32Q8N8J7 132 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 SMC1BQ8NDV3 1235 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 TEX13BQ9BXU2 312 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 RIPK3Q9Y572 518 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 RLFQ13129 1914 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 UQCRHLA0A096LP55 91 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 AP5Z1O43299 807 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 NR1I2O75469 434 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 UQCRHP07919 91 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 STAT3P40763 770 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 CAMK4Q16566 473 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 POTEEQ6S8J3 1075 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 FSIP1Q8NA03 581 aa21.88■■□□□ 1.09
PDLIM2-204ENST00000397760 CCL15-CCL14A0A0B4J2E2 113 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 HSD17B4P51659 736 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 HERVK_113P62684 666 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 ORC2Q13416 577 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 CCL15Q16663 113 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 MRPS27Q92552 414 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 CBX8Q9HC52 389 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 RNF146Q9NTX7 359 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 PARP14Q460N5 1801 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 NEMFO60524 1076 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 CMA1P23946 247 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 USP11P51784 963 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 ANO6Q4KMQ2 910 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 SAPCD2Q86UD0 394 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 FERMT2Q96AC1 680 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 TMEM60Q9H2L4 133 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 GOLPH3LQ9H4A5 285 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 TTC12Q9H892 705 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 BTBD7Q9P203 1132 aa21.87■■□□□ 1.09
PDLIM2-204ENST00000397760 SMCHD1A6NHR9 2005 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 TDP2O95551 362 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 SREBF1P36956 1147 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 ZNF157P51786 506 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 ARHGAP4P98171 946 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 GHRHRQ02643 423 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 GRIN1Q05586 938 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 TKFCQ3LXA3 575 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 PPP4R3AQ6IN85 833 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 CCDC73Q6ZRK6 1079 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 SAMD3Q8N6K7 520 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 KIAA1524Q8TCG1 905 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 BRI3BPQ8WY22 251 aa21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 NAP1L4Q99733 375 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 MAP3K20Q9NYL2 800 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-204ENST00000397760 A0A1B0GVL5 298 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 LAD1O00515 517 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 GLIPR1L2Q4G1C9 344 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 ARL6IP4Q66PJ3 421 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 SHC4Q6S5L8 630 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 ZNF579Q8NAF0 562 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 BTBD19C9JJ37 291 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 PEX10O60683 326 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 GCFC2P16383 781 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 PLCB2Q00722 1185 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 CKAP2LQ8IYA6 745 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 MYRIPQ8NFW9 859 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 CRYGNQ8WXF5 182 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 PAGR1Q9BTK6 254 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 CSRNP2Q9H175 543 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 EHMT1Q9H9B1 1298 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 PNMA3Q9UL41 463 aa21.85■■□□□ 1.09
PDLIM2-204ENST00000397760 CDC25BP30305 580 aa21.84■■□□□ 1.09
PDLIM2-204ENST00000397760 ZNF165P49910 485 aa21.84■■□□□ 1.09
PDLIM2-204ENST00000397760 RESP18Q5W5W9 173 aa21.84■■□□□ 1.09
PDLIM2-204ENST00000397760 NSMFQ6X4W1 530 aa21.84■■□□□ 1.09
PDLIM2-204ENST00000397760 SLC45A1Q9Y2W3 748 aa21.84■■□□□ 1.09
PDLIM2-204ENST00000397760 VWA3AA6NCI4 1184 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 PDHXO00330 501 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 SLC37A4O43826 429 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 OR52Z1P0C646 297 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 RPS6P62753 249 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 FAM160A1Q05DH4 1040 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 SPECC1Q5M775 1068 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 RGMBQ6NW40 437 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 RNF207Q6ZRF8 634 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 ANKRD23Q86SG2 305 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 LUZP1Q86V48 1076 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 PLA2G4DQ86XP0 818 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 RASAL3Q86YV0 1011 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 SYTL5Q8TDW5 730 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 ZNF830Q96NB3 372 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 SPATC1LQ9H0A9 340 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 ACAD9Q9H845 621 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 COL20A1Q9P218 1284 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 DDX25Q9UHL0 483 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.09
PDLIM2-204ENST00000397760 CNMDO75829 334 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 TOMM70O94826 608 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 GTF2F1P35269 517 aaKnown RBP eCLIP21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 PRPHP41219 470 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 NDUFA8P51970 172 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 IL17AQ16552 155 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 DNTTIP2Q5QJE6 756 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 SARM1Q6SZW1 724 aa21.83■■□□□ 1.08
PDLIM2-204ENST00000397760 MOXD1Q6UVY6 613 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms