RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CCNA1P78396 465 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 CRHR2Q13324 411 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
CAPN3-207ENST00000397200 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 Q3C1V9 767 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 NOSTRINQ8IVI9 506 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
CAPN3-207ENST00000397200 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
CAPN3-207ENST00000397200 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 CMA1P23946 247 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 SF3A1Q15459 793 aaKnown RBP16.96■□□□□ 0.3
CAPN3-207ENST00000397200 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 MCF2L2Q86YR7 1114 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 BLIDQ8IZY5 108 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 CHST13Q8NET6 341 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 ACAD9Q9H845 621 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 FBXO40Q9UH90 709 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 USP25Q9UHP3 1055 aa16.96■□□□□ 0.3
CAPN3-207ENST00000397200 NFIBO00712 420 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 OPLAHO14841 1288 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 BCRP11274 1271 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 ERCC3P19447 782 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 NPY5RQ15761 445 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 ANO6Q4KMQ2 910 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
CAPN3-207ENST00000397200 BTBD18B2RXH4 712 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 CFBP00751 764 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 NDUFA8P51970 172 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 C17orf99Q6UX52 265 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 TEX2Q8IWB9 1127 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
CAPN3-207ENST00000397200 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 SHCBP1Q8NEM2 672 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 OXER1Q8TDS5 423 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 MROH8Q9H579 483 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
CAPN3-207ENST00000397200 HPSEQ9Y251 543 aa16.94■□□□□ 0.3
CAPN3-207ENST00000397200 GCOM1H8Y6P7 765 aaPredicted RBP16.93■□□□□ 0.3
CAPN3-207ENST00000397200 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 UBE2SQ16763 222 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 WDR78Q5VTH9 848 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
CAPN3-207ENST00000397200 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
CAPN3-207ENST00000397200 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 MEIS2O14770 477 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
CAPN3-207ENST00000397200 NR5A1Q13285 461 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 RNF207Q6ZRF8 634 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 TIGD1Q96MW7 591 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 PORCNQ9H237 461 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 RNF186Q9NXI6 227 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.92■□□□□ 0.3
CAPN3-207ENST00000397200 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 AP5Z1O43299 807 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 CUTAO60888 179 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 TRPA1O75762 1119 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 ADCY5O95622 1261 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 HOXA13P31271 388 aaPredicted RBP16.92■□□□□ 0.3
CAPN3-207ENST00000397200 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
CAPN3-207ENST00000397200 HSD17B4P51659 736 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 STX1AQ16623 288 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 MAF1Q9H063 256 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 EFCC1Q9HA90 598 aa16.92■□□□□ 0.3
CAPN3-207ENST00000397200 MAP3K20Q9NYL2 800 aaKnown RBP16.92■□□□□ 0.3
CAPN3-207ENST00000397200 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 M0R2N6 131 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 PFKFB1P16118 471 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 GHRHRQ02643 423 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 AP3B2Q13367 1082 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 RESP18Q5W5W9 173 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 KRT25Q7Z3Z0 450 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 TNFRSF25Q93038 417 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
CAPN3-207ENST00000397200 TMEM260Q9NX78 707 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 ZKSCAN5Q9Y2L8 839 aa16.91■□□□□ 0.3
CAPN3-207ENST00000397200 PFASO15067 1338 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 SPDYE3A6NKU9 549 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
CAPN3-207ENST00000397200 MAPK4P31152 587 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 RPS6P62753 249 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms