RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TRIM43Q96BQ3 446 aaPredicted RBP15.22■□□□□ 0.03
SEC13-209ENST00000397117 MAML3Q96JK9 1138 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 AIFM3Q96NN9 605 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 UBA5Q9GZZ9 404 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 PRDM5Q9NQX1 630 aaPredicted RBP15.22■□□□□ 0.03
SEC13-209ENST00000397117 CYTH3O43739 400 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 SCG2P13521 617 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 PFKFB3Q16875 520 aaPredicted RBP15.21■□□□□ 0.03
SEC13-209ENST00000397117 FERMT2Q96AC1 680 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 GBP4Q96PP9 640 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 NUP88Q99567 741 aaPredicted RBP15.21■□□□□ 0.03
SEC13-209ENST00000397117 TTYH1Q9H313 450 aaPredicted RBP15.21■□□□□ 0.03
SEC13-209ENST00000397117 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
SEC13-209ENST00000397117 TLE2Q04725 743 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 PLS1Q14651 629 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 SAFBQ15424 915 aaKnown RBP eCLIP15.21■□□□□ 0.026e-6■□□□□ 10.6
SEC13-209ENST00000397117 PKN1Q16512 942 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 KRT40Q6A162 431 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 TTBK2Q6IQ55 1244 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 FERMT3Q86UX7 667 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 NCAPG2Q86XI2 1143 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 HOMER1Q86YM7 354 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 MAFAQ8NHW3 353 aaPredicted RBP15.21■□□□□ 0.02
SEC13-209ENST00000397117 RIOX1Q9H6W3 641 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 ADAMTS5Q9UNA0 930 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 PHF24Q9UPV7 400 aa15.21■□□□□ 0.02
SEC13-209ENST00000397117 TMEM232C9JQI7 657 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 FLOT1O75955 427 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
SEC13-209ENST00000397117 FCER1AP12319 257 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 SLC16A2P36021 539 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 GNL2Q13823 731 aaKnown RBP15.2■□□□□ 0.02
SEC13-209ENST00000397117 ADGRF4Q8IZF3 695 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 ZSCAN16Q9H4T2 348 aaPredicted RBP15.2■□□□□ 0.02
SEC13-209ENST00000397117 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 NRBP1Q9UHY1 535 aa15.2■□□□□ 0.02
SEC13-209ENST00000397117 TTC28Q96AY4 2481 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 SLC25A27O95847 323 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 ITGB8P26012 769 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 STAT2P52630 851 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 TMEM132BQ14DG7 1078 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 MYLIPQ8WY64 445 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 PIGSQ96S52 555 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 VPS54Q9P1Q0 977 aa15.19■□□□□ 0.02
SEC13-209ENST00000397117 FOXD4L6Q3SYB3 417 aaPredicted RBP15.18■□□□□ 0.02
SEC13-209ENST00000397117 SYDE2Q5VT97 1194 aa15.18■□□□□ 0.02
SEC13-209ENST00000397117 FOXD4L3Q6VB84 417 aaPredicted RBP15.18■□□□□ 0.02
SEC13-209ENST00000397117 CHURC1Q8WUH1 139 aa15.18■□□□□ 0.02
SEC13-209ENST00000397117 JMJD4Q9H9V9 463 aa15.18■□□□□ 0.02
SEC13-209ENST00000397117 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
SEC13-209ENST00000397117 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
SEC13-209ENST00000397117 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 KIAA0355O15063 1070 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 MMP1P03956 469 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 EPHB4P54760 987 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 ZNF792Q3KQV3 632 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 CCDC12Q8WUD4 166 aaPredicted RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 GPKOWQ92917 476 aaPredicted RBP eCLIP15.17■□□□□ 0.024e-7■□□□□ 8.6
SEC13-209ENST00000397117 BRMS1Q9HCU9 246 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 XPNPEP3Q9NQH7 507 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 FEM1BQ9UK73 627 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 KCNJ14Q9UNX9 436 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 hCG_1984214I3L0E3 225 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 ZBTB5O15062 677 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 BAG4O95429 457 aaKnown RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 CLTBP09497 229 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 RARBP10826 455 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 TAL1P17542 331 aaPredicted RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 NLRP5P59047 1200 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 RESTQ13127 1097 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 FAM160B2Q86V87 743 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 ZNF713Q8N859 430 aaPredicted RBP15.17■□□□□ 0.02
SEC13-209ENST00000397117 MMP19Q99542 508 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 TINF2Q9BSI4 451 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
SEC13-209ENST00000397117 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 MYH6P13533 1939 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 TMEM265A0A087WTH1 108 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 PLA2G6O60733 806 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 PGK1P00558 417 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 PGK2P07205 417 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 ZNF865P0CJ78 1059 aaPredicted RBP15.16■□□□□ 0.02
SEC13-209ENST00000397117 CALML3P27482 149 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 NAPAP54920 295 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 CLEC17AQ6ZS10 378 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 BRAPQ7Z569 592 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 RNF180Q86T96 592 aa15.16■□□□□ 0.02
SEC13-209ENST00000397117 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms