RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 STIM1Q13586 685 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
ITGB1-202ENST00000396033 HAS1Q92839 578 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 EXOC1Q9NV70 894 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 GJA10Q969M2 543 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 C7orf25Q9BPX7 421 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
ITGB1-202ENST00000396033 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 CAP2P40123 477 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 USP11P51784 963 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 SV2BQ7L1I2 683 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 NR1I3Q14994 352 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 MCTP2Q6DN12 878 aa13.62□□□□□ -0.23
ITGB1-202ENST00000396033 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 ARHGAP4P98171 946 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 PDE4DQ08499 809 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 GOLGA8FQ08AF8 430 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 GOLGA8DPQ0D2H9 430 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 R3HDM1Q15032 1099 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 FILIP1LQ4L180 1135 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 APTXQ7Z2E3 356 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 GIMAP8Q8ND71 665 aaPredicted RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 LARP4BQ92615 738 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 BLOC1S4Q9NUP1 217 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 MCM6Q14566 821 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 CCDC112Q8NEF3 446 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 PSMA7O14818 248 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 RASA3Q14644 834 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 KIFC2Q96AC6 838 aa13.61□□□□□ -0.23
ITGB1-202ENST00000396033 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 TRMT1Q9NXH9 659 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 ADD3Q9UEY8 706 aaKnown RBP13.61□□□□□ -0.23
ITGB1-202ENST00000396033 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 RPS12P25398 132 aaKnown RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 SPAG1Q07617 926 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 TBX2Q13207 712 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CCAR2Q8N163 923 aaKnown RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 ANKRD20A12PQ8NF67 263 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 RAD54LQ92698 747 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 TEX33O43247 280 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 FOSP01100 380 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 ASNSP08243 561 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 TNNT1P13805 278 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CYP3A7P24462 503 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 HOXA13P31271 388 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CCT6AP40227 531 aaKnown RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 MMP14P50281 582 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 RASSF7Q02833 373 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CCDC174Q6PII3 467 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 EGFRP00533 1210 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 TNFAIP1Q13829 316 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 CHURC1Q8WUH1 139 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-202ENST00000396033 KCNMB3Q9NPA1 279 aa13.6□□□□□ -0.23
ITGB1-202ENST00000396033 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 OPLAHO14841 1288 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 TRAF1Q13077 416 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 KCNJ12Q14500 433 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 KRT31Q15323 416 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 PRR16Q569H4 304 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 MBOAT7Q96N66 472 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 FEZ1Q99689 392 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 GJA3Q9Y6H8 435 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 SREBF1P36956 1147 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 CRYGNQ8WXF5 182 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 LIMA1Q9UHB6 759 aaKnown RBP13.59□□□□□ -0.23
ITGB1-202ENST00000396033 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 KDM3AQ9Y4C1 1321 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 MYMKA6NI61 221 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 H7C1D1 291 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
ITGB1-202ENST00000396033 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
ITGB1-202ENST00000396033 TCP11X2Q5H9J9 407 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 GTPBP4Q9BZE4 634 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms