RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TBX2Q13207 712 aaPredicted RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 CUL4BQ13620 913 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 CDKAL1Q5VV42 579 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 RSRC2Q7L4I2 434 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 RRP36Q96EU6 259 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 TEPSINQ96N21 525 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 KCNMB3Q9NPA1 279 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 GOLGA6L4A6NEF3 574 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 H3BQF6 201 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 ZBTB5O15062 677 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 CCP110O43303 1012 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 KINO60870 393 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 FOSP01100 380 aaPredicted RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 CORO7P57737 925 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 TNIP1Q15025 636 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 IL17AQ16552 155 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 XRRA1Q6P2D8 792 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 LBX2Q6XYB7 198 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 FSIP1Q8NA03 581 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 LPAR1Q92633 364 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 PHKBQ93100 1093 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 ZNF622Q969S3 477 aaKnown RBP eCLIP6.02□□□□□ -1.451e-6■■■□□ 15.3
VPS41-203ENST00000395969 DDX11Q96FC9 970 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 USP40Q9NVE5 1235 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 CYP2D7A0A087X1C5 515 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 EIF3CLB5ME19 914 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 SCP2P22307 547 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 STK38Q15208 465 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 SH3D19Q5HYK7 790 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 APTXQ7Z2E3 356 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 FAM160B2Q86V87 743 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 MICAL1Q8TDZ2 1067 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 NOC3LQ8WTT2 800 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 CCDC34Q96HJ3 373 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 EIF3CQ99613 913 aaKnown RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 JMJD4Q9H9V9 463 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 C6orf50Q9HD87 102 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 PIM2Q9P1W9 311 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 PVALEFA0A1B0GWK0 134 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 KLRF2D3W0D1 207 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 RHOBTB3O94955 611 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 SYKP43405 635 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 LMAN1P49257 510 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 MARSP56192 900 aaKnown RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 TYW1BQ6NUM6 668 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 FERMT3Q86UX7 667 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 PPM1EQ8WY54 764 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 HDAC9Q9UKV0 1011 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 USP20Q9Y2K6 914 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 V9GY48 417 aaPredicted RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 SMIM22K7EJ46 135 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 POLR3DP05423 398 aaPredicted RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 CCDC172P0C7W6 258 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 SREBF1P36956 1147 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 HSD17B4P51659 736 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 MAP3K9P80192 1104 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 PSMD2Q13200 908 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 RASA3Q14644 834 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 EARS2Q5JPH6 523 aaKnown RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 CEP57L1Q8IYX8 460 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 MNS1Q8NEH6 495 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 HNRNPLLQ8WVV9 542 aaKnown RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 AIFM3Q96NN9 605 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 CEP89Q96ST8 783 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 CARD6Q9BX69 1037 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 LRRC27Q9C0I9 530 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 KIAA1683Q9H0B3 1180 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 SH2D4AQ9H788 454 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 ARFGAP3Q9NP61 516 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 RMND1Q9NWS8 449 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 TFIP11Q9UBB9 837 aaKnown RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 ZNF70Q9UC06 446 aaPredicted RBP6.01□□□□□ -1.45
VPS41-203ENST00000395969 CEP83Q9Y592 693 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 PCDHB6Q9Y5E3 794 aa6.01□□□□□ -1.45
VPS41-203ENST00000395969 CCDC151A5D8V7 595 aa6□□□□□ -1.45
VPS41-203ENST00000395969 BECN2A8MW95 431 aa6□□□□□ -1.45
VPS41-203ENST00000395969 C6orf229H3BNL8 230 aa6□□□□□ -1.45
VPS41-203ENST00000395969 AKR1B1P15121 316 aa6□□□□□ -1.45
VPS41-203ENST00000395969 AKAP17AQ02040 695 aaKnown RBP6□□□□□ -1.45
VPS41-203ENST00000395969 JAKMIP3Q5VZ66 844 aa6□□□□□ -1.45
VPS41-203ENST00000395969 LEKR1Q6ZMV7 388 aa6□□□□□ -1.45
VPS41-203ENST00000395969 OXER1Q8TDS5 423 aa6□□□□□ -1.45
VPS41-203ENST00000395969 RABGGTAQ92696 567 aa6□□□□□ -1.45
VPS41-203ENST00000395969 DYNLL2Q96FJ2 89 aa6□□□□□ -1.45
VPS41-203ENST00000395969 L3MBTL3Q96JM7 780 aaPredicted RBP6□□□□□ -1.45
VPS41-203ENST00000395969 SENP7Q9BQF6 1050 aa6□□□□□ -1.45
VPS41-203ENST00000395969 PPME1Q9Y570 386 aa6□□□□□ -1.45
VPS41-203ENST00000395969 KIAA1217Q5T5P2 1943 aa6□□□□□ -1.45
VPS41-203ENST00000395969 A0A0G2JS52 829 aa6□□□□□ -1.45
VPS41-203ENST00000395969 NFKBIEO00221 500 aa6□□□□□ -1.45
VPS41-203ENST00000395969 PPP1R11O60927 126 aaPredicted RBP6□□□□□ -1.45
VPS41-203ENST00000395969 SFPQP23246 707 aaKnown RBP eCLIP6□□□□□ -1.45
VPS41-203ENST00000395969 EVX2Q03828 476 aa6□□□□□ -1.45
VPS41-203ENST00000395969 EN1Q05925 392 aaPredicted RBP6□□□□□ -1.45
VPS41-203ENST00000395969 POSTNQ15063 836 aa6□□□□□ -1.45
VPS41-203ENST00000395969 NONOQ15233 471 aaKnown RBP eCLIP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms