RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 GOLGA8AA7E2F4 631 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 LDHAP00338 332 aaKnown RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 TROVE2P10155 538 aaKnown RBP eCLIP9.82□□□□□ -0.84
MSH5-205ENST00000395853 MRPS35P82673 323 aaKnown RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 CEBPZQ03701 1054 aaKnown RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 EMC10Q5UCC4 262 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 CREB3L3Q68CJ9 461 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 C6orf89Q6UWU4 347 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 CEP128Q6ZU80 1094 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 CATIPQ7Z7H3 387 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 ERICH1Q86X53 443 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 PPP1R14BQ96C90 147 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 ZMAT2Q96NC0 199 aaKnown RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 NR1H4Q96RI1 486 aaPredicted RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 SH3GLB1Q9Y371 365 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.82□□□□□ -0.84
MSH5-205ENST00000395853 UTYO14607 1347 aa9.82□□□□□ -0.84
MSH5-205ENST00000395853 DICER1Q9UPY3 1922 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 IFIT2P09913 472 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 ELF3P78545 371 aaPredicted RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 RASSF7Q02833 373 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 RIPK1Q13546 671 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 USPL1Q5W0Q7 1092 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 ANKRD13DQ6ZTN6 518 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 ZNF473Q8WTR7 871 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 CCDC12Q8WUD4 166 aaPredicted RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 SREK1Q8WXA9 508 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 ZNF653Q96CK0 615 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 METTL22Q9BUU2 404 aaPredicted RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 EPN3Q9H201 632 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 CREBZFQ9NS37 354 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 CIDEBQ9UHD4 219 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 AOX1Q06278 1338 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 UBN2Q6ZU65 1347 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 SH3TC1Q8TE82 1336 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 AKR1B10O60218 316 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 MLH1P40692 756 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 LBRQ14739 615 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 STX1AQ16623 288 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 EPHA10Q5JZY3 1008 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
MSH5-205ENST00000395853 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 QPCTLQ9NXS2 382 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 DDX25Q9UHL0 483 aaKnown RBP9.81□□□□□ -0.84
MSH5-205ENST00000395853 CDC23Q9UJX2 597 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 PRELID1Q9Y255 219 aa9.81□□□□□ -0.84
MSH5-205ENST00000395853 TRIM43BA6NCK2 446 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 DNM1LO00429 736 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 SUPT3HO75486 399 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 STAT6P42226 847 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 TUBB2AQ13885 445 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 GCKRQ14397 625 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 NFIXQ14938 502 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 SGSM1Q2NKQ1 1148 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 ANKRD20A8PQ5CZ79 823 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 GJC2Q5T442 439 aaPredicted RBP9.8□□□□□ -0.84
MSH5-205ENST00000395853 C11orf57Q6ZUT1 292 aaPredicted RBP9.8□□□□□ -0.84
MSH5-205ENST00000395853 CNBD1Q8NA66 436 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 RSPH1Q8WYR4 309 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 TUBB2BQ9BVA1 445 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 EFR3BQ9Y2G0 817 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 PPP2R2CQ9Y2T4 447 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 SUGT1Q9Y2Z0 365 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 CCDC88AQ3V6T2 1871 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 GOLGA8KD6RF30 607 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 H0YIN7 160 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 SERPINB2P05120 415 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 CYP19A1P11511 503 aaPredicted RBP9.8□□□□□ -0.84
MSH5-205ENST00000395853 HOXD10P28358 340 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 KRT85P78386 507 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 PDCLQ13371 301 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 SH2D4BQ5SQS7 431 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 KANK3Q6NY19 840 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 MAATS1Q7Z4T9 603 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 C14orf80Q86SX3 495 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 EXOC3L1Q86VI1 746 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 KLHDC4Q8TBB5 520 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 PALD1Q9ULE6 856 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 R3HDM2Q9Y2K5 976 aaKnown RBP9.8□□□□□ -0.84
MSH5-205ENST00000395853 COL15A1P39059 1388 aa9.8□□□□□ -0.84
MSH5-205ENST00000395853 TARSL2A2RTX5 802 aaKnown RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 POTECB2RU33 542 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 AGPSO00116 658 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 MAP3K13O43283 966 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 DNAJC8O75937 253 aaPredicted RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 FLOT1O75955 427 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 SCTRP47872 440 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 PLOD1Q02809 727 aaPredicted RBP9.79□□□□□ -0.84
MSH5-205ENST00000395853 USH1GQ495M9 461 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 TTC6Q86TZ1 520 aa9.79□□□□□ -0.84
MSH5-205ENST00000395853 DHX40Q8IX18 779 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms