RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 TRAF5O00463 557 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 PICALMQ13492 652 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 TUBB2AQ13885 445 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 TOB2Q14106 344 aaPredicted RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 TBC1D25Q3MII6 688 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 CCDC148Q8NFR7 591 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 TEPSINQ96N21 525 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 CSRNP1Q96S65 589 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 STRBPQ96SI9 672 aaKnown RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 TUBB2BQ9BVA1 445 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
RAE1-202ENST00000395840 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
RAE1-202ENST00000395840 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
RAE1-202ENST00000395840 GPAA1O43292 621 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 PSMA5P28066 241 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 RAB27AP51159 221 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 NAP1L1P55209 391 aaKnown RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 TCP10Q12799 353 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 NFIAQ12857 509 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 SLC5A9Q2M3M2 681 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 MICALCLQ6ZW33 695 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 YTHDF3Q7Z739 585 aaKnown RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 KIAA1328Q86T90 577 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 MAB21L3Q8N8X9 362 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 RSRC1Q96IZ7 334 aaKnown RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 SH3GL2Q99962 352 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 TMEM39BQ9GZU3 492 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 PUS7LQ9H0K6 701 aaKnown RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 ARMT1Q9H993 441 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 ZNF287Q9HBT7 754 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 INTS13Q9NVM9 706 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 PCDHA7Q9UN72 937 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 TLL2Q9Y6L7 1015 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 GOLGA6BA6NDN3 693 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 SOWAHDA6NJG2 315 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 COQ9O75208 318 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 CACNB3P54284 484 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 PLCB4Q15147 1175 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 WHAMMP3Q1A5X7 153 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 NCAPH2Q6IBW4 605 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 CYB5D1Q6P9G0 228 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 SLC35F6Q8N357 371 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 LCORLQ8N3X6 602 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 C3orf20Q8ND61 904 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 OSBP2Q969R2 916 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.08□□□□□ -0.8
RAE1-202ENST00000395840 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 ARPP21Q9UBL0 812 aaPredicted RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 TPX2Q9ULW0 747 aaKnown RBP10.08□□□□□ -0.8
RAE1-202ENST00000395840 NEDD4P46934 1319 aa10.08□□□□□ -0.8
RAE1-202ENST00000395840 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 ECE1P42892 770 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 NT5C2P49902 561 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 MYL5Q02045 173 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 PDCLQ13371 301 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 PDCD2Q16342 344 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 HSP90AA4PQ58FG1 418 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 NBPF12Q5TAG4 269 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 THEMIS2Q5TEJ8 643 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 TRIM74Q86UV6 250 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 TRIM73Q86UV7 250 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 MAPKAPK5Q8IW41 473 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 GSPT2Q8IYD1 628 aaKnown RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 ABT1Q9ULW3 272 aaKnown RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 MYO6Q9UM54 1294 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 ZMYND10O75800 440 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 RPS6KB1P23443 525 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 SBK1Q52WX2 424 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 CST9Q5W186 159 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 METTL16Q86W50 562 aaKnown RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 CCDC50Q8IVM0 306 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 ANKRD13AQ8IZ07 590 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 RPUSD2Q8IZ73 545 aaKnown RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 MAGEC3Q8TD91 643 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 DCP1AQ9NPI6 582 aaPredicted RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
RAE1-202ENST00000395840 SWAP70Q9UH65 585 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
RAE1-202ENST00000395840 USP14P54578 494 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
RAE1-202ENST00000395840 ALX1Q15699 326 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ACCSLQ4AC99 568 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 MYSM1Q5VVJ2 828 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 DRAXINQ8NBI3 349 aaPredicted RBP10.06□□□□□ -0.8
RAE1-202ENST00000395840 SMARCC2Q8TAQ2 1214 aa10.06□□□□□ -0.8
RAE1-202ENST00000395840 ZNF396Q96N95 335 aaPredicted RBP10.06□□□□□ -0.8
RAE1-202ENST00000395840 NAPGQ99747 312 aaPredicted RBP10.06□□□□□ -0.8
RAE1-202ENST00000395840 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms