RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 ENC1O14682 589 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 KRT86O43790 486 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SLC16A2P36021 539 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 HERVK_113P62684 666 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 ZNF543Q08ER8 600 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SMC1AQ14683 1233 aaKnown RBP10.3□□□□□ -0.76
CDRT1-203ENST00000395667 NCAPH2Q6IBW4 605 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SP8Q8IXZ3 490 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 PNMA5Q96PV4 448 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 MXD3Q9BW11 206 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
CDRT1-203ENST00000395667 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SWAP70Q9UH65 585 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 PLIN4Q96Q06 1357 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 OAS2P29728 719 aaKnown RBP10.3□□□□□ -0.76
CDRT1-203ENST00000395667 MEA1Q16626 185 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 MIIPQ5JXC2 388 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 TTBK2Q6IQ55 1244 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 CUL5Q93034 780 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 PNKPQ96T60 521 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 FUT8Q9BYC5 575 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 TTYH3Q9C0H2 523 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 RIC8AQ9NPQ8 531 aa10.3□□□□□ -0.76
CDRT1-203ENST00000395667 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 POLRMTO00411 1230 aaKnown RBP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 FGFR1OPO95684 399 aaKnown RBP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 SSBP05455 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 SNHG28P0DPA3 235 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 PDIA5Q14554 519 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 KCTD1Q719H9 257 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 CERS5Q8N5B7 392 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 RAD54LQ92698 747 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 ERGIC2Q96RQ1 377 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 LRRC27Q9C0I9 530 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 HDAC6Q9UBN7 1215 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 SUGT1Q9Y2Z0 365 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 ERICH4A6NGS2 130 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 RASSF10A6NK89 507 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 PSMD14O00487 310 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 SPA17Q15506 151 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 DDX12PQ92771 950 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 MMRN2Q9H8L6 949 aa10.29□□□□□ -0.76
CDRT1-203ENST00000395667 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
CDRT1-203ENST00000395667 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 NKRFO15226 690 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ERCC3P19447 782 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 AMPD2Q01433 879 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 CYP27A1Q02318 531 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ZSCAN29Q8IWY8 852 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 GUF1Q8N442 669 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 TSG101Q99816 390 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 TMX4Q9H1E5 349 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 SAR1BQ9Y6B6 198 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 AFF2P51816 1311 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 SHMT1P34896 483 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 FAM193AP78312 1265 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 LRRC41Q15345 812 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 SLC27A3Q5K4L6 730 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 NOA1Q8NC60 698 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 GJA10Q969M2 543 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 TANGO6Q9C0B7 1094 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 DEF6Q9H4E7 631 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 RAB21Q9UL25 225 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 MACROD2A1Z1Q3 448 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 ZBTB5O15062 677 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 EDIL3O43854 480 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 GPS2Q13227 327 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 PPP4R3AQ6IN85 833 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 HDXQ7Z353 690 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 TRAPPC11Q7Z392 1133 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 KCNK18Q7Z418 384 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms