RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 NPHP1O15259 732 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 CEACAM5P06731 702 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 SRGNP10124 158 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 BNIP3Q12983 259 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 HRASLS5Q96KN8 279 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 MPHOSPH9Q99550 1183 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 P2RX7Q99572 595 aaKnown RBP7.45□□□□□ -1.22
AP3S1-202ENST00000395548 PTPN22Q9Y2R2 807 aa7.45□□□□□ -1.22
AP3S1-202ENST00000395548 AFDNP55196 1824 aaKnown RBP7.45□□□□□ -1.22
AP3S1-202ENST00000395548 PRAMEF27A3QJZ7 478 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 LRIG2O94898 1065 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 INPP5AQ14642 412 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 SPRED2Q7Z698 418 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 USP48Q86UV5 1035 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
AP3S1-202ENST00000395548 LAMA2P24043 3122 aaKnown RBP7.44□□□□□ -1.22
AP3S1-202ENST00000395548 PRUNE2Q8WUY3 3088 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 RLBP1P12271 317 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 JUNBP17275 347 aaPredicted RBP7.43□□□□□ -1.22
AP3S1-202ENST00000395548 TM4SF4P48230 202 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ST5P78524 1137 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 PTPN11Q06124 597 aaPredicted RBP7.43□□□□□ -1.22
AP3S1-202ENST00000395548 AOC3Q16853 763 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 LRIT3Q3SXY7 679 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ZNF574Q6ZN55 896 aaPredicted RBP7.43□□□□□ -1.22
AP3S1-202ENST00000395548 FAM214BQ7L5A3 538 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ASIC4Q96FT7 647 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ERO1AQ96HE7 468 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 HEXIM2Q96MH2 286 aaKnown RBP7.43□□□□□ -1.22
AP3S1-202ENST00000395548 PSMD1Q99460 953 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 CDHR2Q9BYE9 1310 aa7.43□□□□□ -1.22
AP3S1-202ENST00000395548 COL5A3P25940 1745 aaPredicted RBP7.43□□□□□ -1.22
AP3S1-202ENST00000395548 ERVV-2B6SEH9 535 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 ITIH2P19823 946 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 ETF1P62495 437 aaKnown RBP7.42□□□□□ -1.22
AP3S1-202ENST00000395548 SREBF2Q12772 1141 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 PSMD2Q13200 908 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 RASAL3Q86YV0 1011 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 GAL3ST3Q96A11 431 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 GOLGA2P5Q9HBQ8 144 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 PLAGL2Q9UPG8 496 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 RTL1A6NKG5 1358 aa7.42□□□□□ -1.22
AP3S1-202ENST00000395548 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 LAMB4A4D0S4 1761 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 BCORQ6W2J9 1755 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 SLX4Q8IY92 1834 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 MYH14Q7Z406 1995 aaKnown RBP7.41□□□□□ -1.22
AP3S1-202ENST00000395548 GNAT3A8MTJ3 354 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 BIN1O00499 593 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 CD8BP10966 210 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 NPR1P16066 1061 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 FUT4P22083 530 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 BMP8BP34820 402 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 DAB2P98082 770 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 ARHGEF6Q15052 776 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 SLC9C1Q4G0N8 1177 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 WIPI1Q5MNZ9 446 aaPredicted RBP7.41□□□□□ -1.22
AP3S1-202ENST00000395548 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
AP3S1-202ENST00000395548 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 AGMOQ6ZNB7 445 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 HID1Q8IV36 788 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 CNBD1Q8NA66 436 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 C1QTNF1Q9BXJ1 281 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 FOXQ1Q9C009 403 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 TNKS2Q9H2K2 1166 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 PRDM5Q9NQX1 630 aaPredicted RBP7.41□□□□□ -1.22
AP3S1-202ENST00000395548 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 TACC3Q9Y6A5 838 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 U3KQE9 123 aa7.41□□□□□ -1.22
AP3S1-202ENST00000395548 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
AP3S1-202ENST00000395548 EOMESO95936 686 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 ITGB5P18084 799 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 CAP2P40123 477 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 LIG3P49916 1009 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 FKBP1BP68106 108 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 TAF1CQ15572 869 aaPredicted RBP7.4□□□□□ -1.22
AP3S1-202ENST00000395548 FAM109BQ6ICB4 259 aaPredicted RBP7.4□□□□□ -1.22
AP3S1-202ENST00000395548 DNAJC14Q6Y2X3 702 aaPredicted RBP7.4□□□□□ -1.22
AP3S1-202ENST00000395548 HDGFL2Q7Z4V5 671 aaPredicted RBP7.4□□□□□ -1.22
AP3S1-202ENST00000395548 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 MFSD2AQ8NA29 543 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 PI4K2BQ8TCG2 481 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 MIR1-1HGQ9H1L0 117 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 STAP2Q9UGK3 403 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms