RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GLT8D2Q9H1C3 349 aa21.89■■□□□ 1.09
LMNB1-202ENST00000395354 ZFYVE28Q9HCC9 887 aa21.89■■□□□ 1.09
LMNB1-202ENST00000395354 HOOK1Q9UJC3 728 aaKnown RBP21.89■■□□□ 1.09
LMNB1-202ENST00000395354 LAD1O00515 517 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 WNT7AO00755 349 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 CA12O43570 354 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 ADCY7P51828 1080 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 GRIN1Q05586 938 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 TMEM132BQ14DG7 1078 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 KRBA2Q6ZNG9 492 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 REPS2Q8NFH8 660 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 PAGR1Q9BTK6 254 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 RAVER2Q9HCJ3 691 aaKnown RBP21.88■■□□□ 1.09
LMNB1-202ENST00000395354 BTBD7Q9P203 1132 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 RABGAP1Q9Y3P9 1069 aa21.88■■□□□ 1.09
LMNB1-202ENST00000395354 PEX10O60683 326 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 KANK3Q6NY19 840 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 REXO1Q8N1G1 1221 aaKnown RBP21.87■■□□□ 1.09
LMNB1-202ENST00000395354 C4orf32Q8N8J7 132 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 RASGRP4Q8TDF6 673 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 TXNRD2Q9NNW7 524 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 RIC8AQ9NPQ8 531 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 ZNF536O15090 1300 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 MCM7P33993 719 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 CRHR2Q13324 411 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 PLS1Q14651 629 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 FBXO11Q86XK2 927 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 CNNM3Q8NE01 707 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 AGBL1Q96MI9 1066 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 PYM1Q9BRP8 204 aaKnown RBP21.87■■□□□ 1.09
LMNB1-202ENST00000395354 AMNQ9BXJ7 453 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 RNF186Q9NXI6 227 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 USP25Q9UHP3 1055 aa21.87■■□□□ 1.09
LMNB1-202ENST00000395354 ZNF214Q9UL59 606 aaPredicted RBP21.87■■□□□ 1.09
LMNB1-202ENST00000395354 ATP2A1O14983 1001 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 TLR2O60603 784 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 PPP1R11O60927 126 aaPredicted RBP21.86■■□□□ 1.09
LMNB1-202ENST00000395354 CNMDO75829 334 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 ICAM1P05362 532 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 STAT3P40763 770 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 ZNF165P49910 485 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 OAZ1P54368 228 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 ZRSR1Q15695 479 aaKnown RBP21.86■■□□□ 1.09
LMNB1-202ENST00000395354 INF2Q27J81 1249 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 ANKRD13CQ8N6S4 541 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 COA7Q96BR5 231 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 CCDC34Q96HJ3 373 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 CBX8Q9HC52 389 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 TUBE1Q9UJT0 475 aa21.86■■□□□ 1.09
LMNB1-202ENST00000395354 TRPA1O75762 1119 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 LONP1P36776 959 aaKnown RBP21.85■■□□□ 1.09
LMNB1-202ENST00000395354 PRPHP41219 470 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 MRPL12P52815 198 aaKnown RBP21.85■■□□□ 1.09
LMNB1-202ENST00000395354 Q3C1V9 767 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 LONRF3Q496Y0 759 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 GPRC5AQ8NFJ5 357 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 TEX13BQ9BXU2 312 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 NAT10Q9H0A0 1025 aaKnown RBP21.85■■□□□ 1.09
LMNB1-202ENST00000395354 CPA4Q9UI42 421 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 PNMA2Q9UL42 364 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 CCPG1Q9ULG6 757 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 PCDHA1Q9Y5I3 950 aa21.85■■□□□ 1.09
LMNB1-202ENST00000395354 COL11A1P12107 1806 aaPredicted RBP21.85■■□□□ 1.09
LMNB1-202ENST00000395354 ADGRA2Q96PE1 1338 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 TRAF1Q13077 416 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 USH1GQ495M9 461 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 SPECC1Q5M775 1068 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 NEK8Q86SG6 692 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 SPATC1LQ9H0A9 340 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 DNAJC25Q9H1X3 360 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 MORF4L1Q9UBU8 362 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 THSD7BQ9C0I4 1608 aa21.84■■□□□ 1.09
LMNB1-202ENST00000395354 POLR2DO15514 142 aaKnown RBP21.83■■□□□ 1.09
LMNB1-202ENST00000395354 TBC1D8O95759 1140 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 ERVK-9P63128 1117 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 ERVK-24P63145 666 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 MAP2K1Q02750 393 aaPredicted RBP21.83■■□□□ 1.09
LMNB1-202ENST00000395354 SNRNP48Q6IEG0 339 aaKnown RBP21.83■■□□□ 1.09
LMNB1-202ENST00000395354 C17orf99Q6UX52 265 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 TEX2Q8IWB9 1127 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 CEP57L1Q8IYX8 460 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 CUL5Q93034 780 aa21.83■■□□□ 1.09
LMNB1-202ENST00000395354 SMCHD1A6NHR9 2005 aa21.83■■□□□ 1.08
LMNB1-202ENST00000395354 VWA3AA6NCI4 1184 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 BCRP11274 1271 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 CLK2P49760 499 aaKnown RBP21.82■■□□□ 1.08
LMNB1-202ENST00000395354 NLRP12P59046 1061 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 MDM2Q00987 491 aaPredicted RBP21.82■■□□□ 1.08
LMNB1-202ENST00000395354 MCTP2Q6DN12 878 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 SYMPKQ92797 1274 aaKnown RBP21.82■■□□□ 1.08
LMNB1-202ENST00000395354 BPIFA3Q9BQP9 254 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 R3HDMLQ9H3Y0 253 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 RIPK3Q9Y572 518 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 ALAS1P13196 640 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 TAL1P17542 331 aaPredicted RBP21.82■■□□□ 1.08
LMNB1-202ENST00000395354 FAM110CQ1W6H9 321 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 RIOX2Q8IUF8 465 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 TRIM44Q96DX7 344 aaPredicted RBP21.82■■□□□ 1.08
LMNB1-202ENST00000395354 CFHR5Q9BXR6 569 aa21.82■■□□□ 1.08
LMNB1-202ENST00000395354 MOV10L1Q9BXT6 1211 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms