RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GH2P01242 217 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 CAP2P40123 477 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 GNAQP50148 359 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 SEPT2Q15019 361 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 MTFR1Q15390 333 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 SHROOM1Q2M3G4 852 aaPredicted RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 TSPAN10Q9H1Z9 355 aaPredicted RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 SCHIP1Q9P0W5 487 aaPredicted RBP13.2□□□□□ -0.3
RTN1-203ENST00000395090 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 HRH3Q9Y5N1 445 aa13.2□□□□□ -0.3
RTN1-203ENST00000395090 MYH8P13535 1937 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
RTN1-203ENST00000395090 GDF11O95390 407 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
RTN1-203ENST00000395090 IGFBP4P22692 258 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 EPHX2P34913 555 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
RTN1-203ENST00000395090 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
RTN1-203ENST00000395090 PHKBQ93100 1093 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
RTN1-203ENST00000395090 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
RTN1-203ENST00000395090 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
RTN1-203ENST00000395090 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 PDHBP11177 359 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
RTN1-203ENST00000395090 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
RTN1-203ENST00000395090 DEXIO95424 95 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 F13A1P00488 732 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 ASNSP08243 561 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 FOXK2Q01167 660 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 ICA1Q05084 483 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 WASF1Q92558 559 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
RTN1-203ENST00000395090 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
RTN1-203ENST00000395090 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
RTN1-203ENST00000395090 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 UPP2O95045 317 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
RTN1-203ENST00000395090 CENPCQ03188 943 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 PKN1Q16512 942 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
RTN1-203ENST00000395090 SCN4AP35499 1836 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 A0A1W2PRG0 241 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 H3BQV1 296 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 SCNN1AP37088 669 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
RTN1-203ENST00000395090 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
RTN1-203ENST00000395090 LINC00528Q8N1L1 170 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 ZNF341Q9BYN7 854 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
RTN1-203ENST00000395090 POLR2AP24928 1970 aaKnown RBP13.15□□□□□ -0.3
RTN1-203ENST00000395090 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
RTN1-203ENST00000395090 F5H6K3 240 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 CYTH3O43739 400 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
RTN1-203ENST00000395090 AVPP01185 164 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 KLRC3Q07444 240 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 NFKBIBQ15653 356 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
RTN1-203ENST00000395090 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.3
RTN1-203ENST00000395090 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 MTMR7Q9Y216 660 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
RTN1-203ENST00000395090 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms