RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CAMKK2Q96RR4 588 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 MRPL44Q9H9J2 332 aaKnown RBP15.64■□□□□ 0.09
SNCA-204ENST00000394989 PSMA7O14818 248 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 FECHP22830 423 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 NUP88Q99567 741 aaPredicted RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 FEZ1Q99689 392 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 SRRTQ9BXP5 876 aaKnown RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 DDX25Q9UHL0 483 aaKnown RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 PSME4Q14997 1843 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 A0A0U1RQJ8 604 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 MYMKA6NI61 221 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 MCM6Q14566 821 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 CDC37Q16543 378 aaPredicted RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 TMEM179Q6ZVK1 233 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 ATRIPQ8WXE1 791 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 P2RX7Q99572 595 aaKnown RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 THAP9Q9H5L6 903 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 EXOC1Q9NV70 894 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 PCDHA1Q9Y5I3 950 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 F5H6K3 240 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 KLRC3Q07444 240 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 LARP4BQ92615 738 aaKnown RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 DHTKD1Q96HY7 919 aaPredicted RBP15.63■□□□□ 0.09
SNCA-204ENST00000394989 TRIM47Q96LD4 638 aa15.63■□□□□ 0.09
SNCA-204ENST00000394989 COL4A5P29400 1685 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNCA-204ENST00000394989 PPIP5K2O43314 1243 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 SLU7O95391 586 aaKnown RBP15.62■□□□□ 0.09
SNCA-204ENST00000394989 SNAP25P60880 206 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 IRX5P78411 483 aaPredicted RBP15.62■□□□□ 0.09
SNCA-204ENST00000394989 STIM1Q13586 685 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ELF2Q15723 593 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 TMEM266Q2M3C6 531 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ABCB5Q2M3G0 1257 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ANKRD40Q6AI12 368 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ZNF507Q8TCN5 953 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 WDR24Q96S15 920 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
SNCA-204ENST00000394989 AMPD3Q01432 767 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 UBXN1Q04323 297 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 SV2BQ7L1I2 683 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ABHD10Q9NUJ1 306 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 STK17AQ9UEE5 414 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 ADGRG1Q9Y653 693 aa15.62■□□□□ 0.09
SNCA-204ENST00000394989 MEIS2O14770 477 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 ENTPD3O75355 529 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
SNCA-204ENST00000394989 TMEM119Q4V9L6 283 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 P2RX5Q93086 422 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNCA-204ENST00000394989 LGALS16A8MUM7 142 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 CCNE1P24864 410 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 ERVK-24P63145 666 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 RAD54LQ92698 747 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 UIMC1Q96RL1 719 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 SLC39A2Q9NP94 309 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
SNCA-204ENST00000394989 A0A1W2PRG0 241 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 NDUFB10O96000 172 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 GH2P01242 217 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 COBLL1Q53SF7 1204 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 CSGALNACT2Q8N6G5 542 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 MB21D1Q8N884 522 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 CSRNP1Q96S65 589 aa15.61■□□□□ 0.09
SNCA-204ENST00000394989 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
SNCA-204ENST00000394989 COL2A1P02458 1487 aaPredicted RBP15.6■□□□□ 0.09
SNCA-204ENST00000394989 TAL1P17542 331 aaPredicted RBP15.6■□□□□ 0.09
SNCA-204ENST00000394989 DYMQ7RTS9 669 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
SNCA-204ENST00000394989 RAB34Q9BZG1 259 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 IRX2Q9BZI1 471 aaPredicted RBP15.6■□□□□ 0.09
SNCA-204ENST00000394989 SEMA6BQ9H3T3 888 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 GOLGA6L9A6NEM1 432 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 CCDC175P0C221 793 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 KRT79Q5XKE5 535 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 KIFC2Q96AC6 838 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 CCDC51Q96ER9 411 aa15.6■□□□□ 0.09
SNCA-204ENST00000394989 GCFC2P16383 781 aaKnown RBP15.59■□□□□ 0.09
SNCA-204ENST00000394989 TERF2Q15554 542 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 CC2D2BQ6DHV5 1058 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 CNNM4Q6P4Q7 775 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 UNC13DQ70J99 1090 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 CDK5RAP3Q96JB5 506 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 ANO3Q9BYT9 981 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 KCNMB3Q9NPA1 279 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 STK32BQ9NY57 414 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 PCDHA12Q9UN75 941 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 TTC26A0AVF1 554 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 B4DLN1 442 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 GNG11P61952 73 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 EHHADHQ08426 723 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 SUPT20HQ8NEM7 779 aa15.59■□□□□ 0.09
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