RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RGS20O76081 388 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 FPGSQ05932 587 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
ATG4A-205ENST00000394892 FBXO11Q86XK2 927 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 IL31RAQ8NI17 732 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 GLT1D1Q96MS3 346 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 PIGSQ96S52 555 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 MYL10Q9BUA6 226 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 TRPV6Q9H1D0 765 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 LY9Q9HBG7 655 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 PRDM6Q9NQX0 595 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 ADD3Q9UEY8 706 aaKnown RBP10.33□□□□□ -0.76
ATG4A-205ENST00000394892 ABCB11O95342 1321 aa10.33□□□□□ -0.76
ATG4A-205ENST00000394892 MCM3APO60318 1980 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-205ENST00000394892 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-205ENST00000394892 TIMP1P01033 207 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 HSD17B4P51659 736 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 PURAQ00577 322 aaKnown RBP10.32□□□□□ -0.76
ATG4A-205ENST00000394892 ITGA7Q13683 1181 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 BMP2KLQ5H9B9 411 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 NCOA7Q8NI08 942 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 CTAGE1Q96RT6 745 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 BCAS3Q9H6U6 928 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 SPC25Q9HBM1 224 aa10.32□□□□□ -0.76
ATG4A-205ENST00000394892 A6NJR5 290 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 SH2B2O14492 632 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 ZBTB5O15062 677 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 B4GALT4O60513 344 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 CSF2RAP15509 400 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 HOXA13P31271 388 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 CYP2C18P33260 490 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 PDE4DQ08499 809 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 WTAPQ15007 396 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 TMEM67Q5HYA8 995 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 TMEM240Q5SV17 173 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 RASIP1Q5U651 963 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 MFSD5Q6N075 450 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 RASEFQ8IZ41 740 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 VTI1AQ96AJ9 217 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 RMDN3Q96TC7 470 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 LRRC2Q9BYS8 371 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 AP5M1Q9H0R1 490 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 PNMA2Q9UL42 364 aa10.31□□□□□ -0.76
ATG4A-205ENST00000394892 MRPL11Q9Y3B7 192 aaKnown RBP10.31□□□□□ -0.76
ATG4A-205ENST00000394892 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 PRC1O43663 620 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 CABYRO75952 493 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 PLEKHA8P1O95397 391 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 CFBP00751 764 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 NR3C2P08235 984 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 ACRP10323 421 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 TXNP10599 105 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 RXRAP19793 462 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 SP2Q02086 613 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 TRDNQ13061 729 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 SEPT14Q6ZU15 432 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 HOMER1Q86YM7 354 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 RAB11FIP4Q86YS3 637 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 ZNF654Q8IZM8 581 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 CMTR1Q8N1G2 835 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 SRBD1Q8N5C6 995 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 OR6J1Q8NGC5 347 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 NSUN6Q8TEA1 469 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 SCFD2Q8WU76 684 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 KAT2BQ92831 832 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 PDCD2LQ9BRP1 358 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 NOC4LQ9BVI4 516 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 AMNQ9BXJ7 453 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 MAF1Q9H063 256 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 WNT8AQ9H1J5 351 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 ALDH8A1Q9H2A2 487 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 TRMT13Q9NUP7 481 aaKnown RBP10.3□□□□□ -0.76
ATG4A-205ENST00000394892 TELO2Q9Y4R8 837 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 PCDHA1Q9Y5I3 950 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 A0A0C4DFX4 3053 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 MROH7Q68CQ1 1323 aa10.3□□□□□ -0.76
ATG4A-205ENST00000394892 GRXCR1A8MXD5 290 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 MYL3P08590 195 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 CYP2C9P11712 490 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 DNAJB2P25686 324 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 PPP2R5BQ15173 497 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 ADCK5Q3MIX3 580 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
ATG4A-205ENST00000394892 VSIG10LQ86VR7 867 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms