RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 SYDE2Q5VT97 1194 aa23.24■■□□□ 1.31
UPK3B-203ENST00000394849 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
UPK3B-203ENST00000394849 AFAP1L1Q8TED9 768 aa23.24■■□□□ 1.31
UPK3B-203ENST00000394849 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
UPK3B-203ENST00000394849 ANAPC4Q9UJX5 808 aa23.24■■□□□ 1.31
UPK3B-203ENST00000394849 NFIBO00712 420 aa23.23■■□□□ 1.31
UPK3B-203ENST00000394849 RANBP6O60518 1105 aaKnown RBP23.23■■□□□ 1.31
UPK3B-203ENST00000394849 TSHZ3Q63HK5 1081 aa23.23■■□□□ 1.31
UPK3B-203ENST00000394849 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
UPK3B-203ENST00000394849 MAF1Q9H063 256 aa23.23■■□□□ 1.31
UPK3B-203ENST00000394849 TET1Q8NFU7 2136 aa23.23■■□□□ 1.31
UPK3B-203ENST00000394849 TRIP12Q14669 1992 aaPredicted RBP23.22■■□□□ 1.31
UPK3B-203ENST00000394849 ORC4O43929 436 aa23.22■■□□□ 1.31
UPK3B-203ENST00000394849 NMT2O60551 498 aa23.22■■□□□ 1.31
UPK3B-203ENST00000394849 EDNRBP24530 442 aa23.22■■□□□ 1.31
UPK3B-203ENST00000394849 TXNP10599 105 aaKnown RBP23.21■■□□□ 1.31
UPK3B-203ENST00000394849 TOP1P11387 765 aaKnown RBP23.21■■□□□ 1.31
UPK3B-203ENST00000394849 CALML3P27482 149 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 KRT40Q6A162 431 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 SESTD1Q86VW0 696 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 ZBED2Q9BTP6 218 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 MTMR7Q9Y216 660 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 PIEZO1Q92508 2521 aa23.21■■□□□ 1.31
UPK3B-203ENST00000394849 BRWD1Q9NSI6 2320 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 WDR19Q8NEZ3 1342 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 LPXNO60711 386 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 EFCAB14O75071 495 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 FGRP09769 529 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 SLC16A2P36021 539 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 RPS6P62753 249 aaKnown RBP23.2■■□□□ 1.3
UPK3B-203ENST00000394849 CTDSPL2Q05D32 466 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 PTGISQ16647 500 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 CLEC4DQ8WXI8 215 aa23.2■■□□□ 1.3
UPK3B-203ENST00000394849 ARHGEF15O94989 841 aa23.19■■□□□ 1.3
UPK3B-203ENST00000394849 WDR5P61964 334 aaKnown RBP23.19■■□□□ 1.3
UPK3B-203ENST00000394849 TTBK2Q6IQ55 1244 aa23.19■■□□□ 1.3
UPK3B-203ENST00000394849 SLC30A10Q6XR72 485 aa23.19■■□□□ 1.3
UPK3B-203ENST00000394849 RGS22Q8NE09 1264 aa23.19■■□□□ 1.3
UPK3B-203ENST00000394849 TCP11L1Q9NUJ3 509 aa23.19■■□□□ 1.3
UPK3B-203ENST00000394849 ABHD14A-ACY1A0A1B0GW23 586 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 PI4K2BG5E9Z4 385 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 SELPP16109 830 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 RBL2Q08999 1139 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 CNKSR3Q6P9H4 555 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 RASGRP2Q7LDG7 609 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 RAD9AQ99638 391 aa23.18■■□□□ 1.3
UPK3B-203ENST00000394849 COL4A4P53420 1690 aaPredicted RBP23.17■■□□□ 1.3
UPK3B-203ENST00000394849 ALX1Q15699 326 aa23.17■■□□□ 1.3
UPK3B-203ENST00000394849 C20orf194Q5TEA3 1177 aa23.17■■□□□ 1.3
UPK3B-203ENST00000394849 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
UPK3B-203ENST00000394849 TMEM47Q9BQJ4 181 aa23.17■■□□□ 1.3
UPK3B-203ENST00000394849 PTPRSQ13332 1948 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 ERVK-21P61565 698 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 LRRC8DQ7L1W4 858 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 COPS5Q92905 334 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 TTC14Q96N46 770 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
UPK3B-203ENST00000394849 GPCPD1Q9NPB8 672 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 INCENPQ9NQS7 918 aa23.16■■□□□ 1.3
UPK3B-203ENST00000394849 FOXP2O15409 715 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 GJB5O95377 273 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 CXCL10P02778 98 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 PDHBP11177 359 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 CASTP20810 708 aaKnown RBP23.15■■□□□ 1.3
UPK3B-203ENST00000394849 TOMM22Q9NS69 142 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 MUC6Q6W4X9 2439 aa23.15■■□□□ 1.3
UPK3B-203ENST00000394849 FRMPD2Q68DX3 1309 aaPredicted RBP23.14■■□□□ 1.3
UPK3B-203ENST00000394849 GH1P01241 217 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 CHMP4BP1P59074 171 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 ZNF543Q08ER8 600 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 CCDC62Q6P9F0 684 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 SUGCTQ9HAC7 445 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 C11orf16Q9NQ32 467 aa23.14■■□□□ 1.29
UPK3B-203ENST00000394849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 LCHNA4D1U4 455 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 MMP3P08254 477 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 IKBKEQ14164 716 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 LEXMQ3ZCV2 418 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 GPATCH4Q5T3I0 446 aaKnown RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 GDF6Q6KF10 455 aaPredicted RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 GDPD5Q8WTR4 605 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 AFG1LQ8WV93 481 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 KATNAL1Q9BW62 490 aa23.13■■□□□ 1.29
UPK3B-203ENST00000394849 UBE2ZQ9H832 354 aaPredicted RBP23.13■■□□□ 1.29
UPK3B-203ENST00000394849 PRR33A8MZF0 331 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 ARIH2O95376 493 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 CKBP12277 381 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 GPNMBQ14956 572 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 DGKDQ16760 1214 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 PUS10Q3MIT2 529 aaKnown RBP23.12■■□□□ 1.29
UPK3B-203ENST00000394849 TICAM2Q86XR7 235 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 NSUN6Q8TEA1 469 aaKnown RBP23.12■■□□□ 1.29
UPK3B-203ENST00000394849 PPP1R13LQ8WUF5 828 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 IWS1Q96ST2 819 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 GTF2IRD1Q9UHL9 959 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 CTNNA3Q9UI47 895 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms