RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 EFCAB8A8MWE9 144 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 EEF2P13639 858 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 H2AFXP16104 143 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 TMEM119Q4V9L6 283 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 FAM114A1Q8IWE2 563 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 HAS1Q92839 578 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 MRFAP1Q9Y605 127 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 TADA3O75528 432 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 RAD54LQ92698 747 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 TUBGCP2Q9BSJ2 902 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 CAPN11Q9UMQ6 739 aa17.15■□□□□ 0.34
UBE2D3-207ENST00000394801 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 POTEMA6NI47 508 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 CACNB3P54284 484 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 TCP10Q12799 353 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 MCM6Q14566 821 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 OR8K1Q8NGG5 319 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 CDK5RAP3Q96JB5 506 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 DNAJC7Q99615 494 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 OGFRQ9NZT2 677 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 SLX4Q8IY92 1834 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 EHHADHQ08426 723 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 MNS1Q8NEH6 495 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 SNX29Q8TEQ0 813 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 UBXN4Q92575 508 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 NUDT12Q9BQG2 462 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 CARD6Q9BX69 1037 aa17.14■□□□□ 0.33
UBE2D3-207ENST00000394801 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 SLC1A4P43007 532 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 USP11P51784 963 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 HYIQ5T013 277 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 SLFN13Q68D06 897 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 TMEM179Q6ZVK1 233 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 IRX2Q9BZI1 471 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 ATRNL1Q5VV63 1379 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 CYP3A7-CYP3A51PA0A087WV96 503 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 KIF5CO60282 957 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 CYP3A7P24462 503 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 RBM5P52756 815 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 GUF1Q8N442 669 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 NUP58Q9BVL2 599 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
UBE2D3-207ENST00000394801 A0A0U1RQJ8 604 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 PSMD2Q13200 908 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
UBE2D3-207ENST00000394801 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 FAM196BA6NMK8 535 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 SLC26A4O43511 780 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 ENTPD3O75355 529 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 SEPT2Q15019 361 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 SHROOM1Q2M3G4 852 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 MYO1AQ9UBC5 1043 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 B4DLN1 442 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 ECM1Q16610 540 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 MEA1Q16626 185 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 FIGNQ5HY92 759 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 HPS3Q969F9 1004 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 CHP1Q99653 195 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 EPN1Q9Y6I3 576 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-207ENST00000394801 COL2A1P02458 1487 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 ABCB11O95342 1321 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 RASSF10A6NK89 507 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
UBE2D3-207ENST00000394801 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms