RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SELENONQ9NZV5 590 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 ASPRV1Q53RT3 343 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 PLIN2Q99541 437 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CARD6Q9BX69 1037 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 DCTPP1Q9H773 170 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 PCDHB8Q9UN66 801 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 NLRP12P59046 1061 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 BEND3Q5T5X7 828 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF772Q68DY9 489 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 IP6K1Q92551 441 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 LRRC4Q9HBW1 653 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF202O95125 648 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 CLCN1P35523 988 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 USP26Q9BXU7 913 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 INO80BQ9C086 356 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SCINQ9Y6U3 715 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 PAPOLAP51003 745 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 IFRD2Q12894 506 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZYXQ15942 572 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 RASEFQ8IZ41 740 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SLC7A5P2Q9GIP4 190 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SEPT2Q15019 361 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF790Q6PG37 636 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 C2CD5Q86YS7 1000 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 MYLK4Q86YV6 388 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 DNAAF3Q8N9W5 541 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 XAGE2Q96GT9 111 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZFP91Q96JP5 570 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 DDX50Q9BQ39 737 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 CFAP43Q8NDM7 1665 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ACTN1P12814 892 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ICA1Q05084 483 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 MTRQ99707 1265 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 DSCC1Q9BVC3 393 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 RNMTO43148 476 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 MAEAQ7L5Y9 396 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 NEK8Q86SG6 692 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 KIRREL3Q8IZU9 778 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 NLGN1Q8N2Q7 840 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 MRGBPQ9NV56 204 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZMYM3Q14202 1370 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 STK25O00506 426 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 CFAP61Q8NHU2 1237 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 CHCHD3Q9NX63 227 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 POLR3AO14802 1390 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 KAZNQ674X7 775 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 DIS3L2Q8IYB7 885 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 LSM14BQ9BX40 385 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 PANK4Q9NVE7 773 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 NFU1Q9UMS0 254 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 B4E1Z4 1266 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ERVV-2B6SEH9 535 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 NT5C1BQ96P26 610 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 ZBED2Q9BTP6 218 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM55Q9BYV6 548 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 PCDHA1Q9Y5I3 950 aa8.06□□□□□ -1.12
SYNE2-205ENST00000394768 EDC4Q6P2E9 1401 aaKnown RBP8.06□□□□□ -1.12
SYNE2-205ENST00000394768 GOLGA8IPA6NC78 632 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 MAN1A2O60476 641 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 TRAPPC10P48553 1259 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 RRAGAQ7L523 313 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 URGCPQ8TCY9 931 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SMYD2Q9NRG4 433 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGEF12Q9NZN5 1544 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 H7C0C1 242 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 LONP1P36776 959 aaKnown RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ATP5OP48047 213 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 CYP2J2P51589 502 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 RASSF7Q02833 373 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 GABPB1Q06547 395 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 KRBA2Q6ZNG9 492 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 GDAP1Q8TB36 358 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SNX19Q92543 992 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 YWHAGP61981 247 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 AMNQ9BXJ7 453 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF148Q9UQR1 794 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 MED23Q9ULK4 1368 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SGK1O00141 431 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 KDM1AO60341 852 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 TEDDM1Q5T9Z0 273 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ANKS3Q6ZW76 656 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ZMAT2Q96NC0 199 aaKnown RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ABCA5Q8WWZ7 1642 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SLFN12LQ6IEE8 588 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 KBTBD3Q8NAB2 608 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms