RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TMEM260Q9NX78 707 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 MYH7BA7E2Y1 1941 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 ZEB2O60315 1214 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 NAPAP54920 295 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 UBXN1Q04323 297 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 TRIM14Q14142 442 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 KIAA0895Q8NCT3 520 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 CUEDC2Q9H467 287 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 DAGLAQ9Y4D2 1042 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 SERPINB2P05120 415 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 UBA7P41226 1012 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-204ENST00000394601 CYP26C1Q6V0L0 522 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 CABP7Q86V35 215 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 SLC35F6Q8N357 371 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
PTBP1-204ENST00000394601 BLOC1S4Q9NUP1 217 aa17.31■□□□□ 0.36
PTBP1-204ENST00000394601 FCER1AP12319 257 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■□□ 18.3
PTBP1-204ENST00000394601 MEA1Q16626 185 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 RPGRQ92834 1020 aaKnown RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 MAGEF1Q9HAY2 307 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 TTF2Q9UNY4 1162 aaKnown RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 SRGNP10124 158 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 KRT9P35527 623 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 AMOTL1Q8IY63 956 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CERS5Q8N5B7 392 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 GJD4Q96KN9 370 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 UBA5Q9GZZ9 404 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 SUFUQ9UMX1 484 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 GUCA1BQ9UMX6 200 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CAPN7Q9Y6W3 813 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 MYH4Q9Y623 1939 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 SRGAP2O75044 1071 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 GRB10Q13322 594 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 MCTP2Q6DN12 878 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 SRGAP1Q7Z6B7 1085 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CEP57Q86XR8 500 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 DHTKD1Q96HY7 919 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-204ENST00000394601 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 CDC23Q9UJX2 597 aa17.3■□□□□ 0.36
PTBP1-204ENST00000394601 SLC37A4O43826 429 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 KLK7P49862 253 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 HERVK_113P62684 666 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 MMS22LQ6ZRQ5 1243 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 BCAS4Q8TDM0 211 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 KAT2BQ92831 832 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-204ENST00000394601 ZNF287Q9HBT7 754 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-204ENST00000394601 TRIM10Q9UDY6 481 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 TECP42680 631 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 CORO7P57737 925 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 HPS3Q969F9 1004 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 RRP36Q96EU6 259 aaKnown RBP17.29■□□□□ 0.36
PTBP1-204ENST00000394601 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
PTBP1-204ENST00000394601 BBOX1O75936 387 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 CLK2P49760 499 aaKnown RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 DNA2P51530 1060 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 GIMAP7Q8NHV1 300 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 YY1AP1Q9H869 796 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 NDUFA10O95299 355 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 PSMB7Q99436 277 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 C6orf50Q9HD87 102 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 COL11A2P13942 1736 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 EBAG9O00559 213 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 AKR1B1P15121 316 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 PLCG2P16885 1265 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 SCP2P22307 547 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 GNA11P29992 359 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 ATP1A2P50993 1020 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms