RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 PCDHA12Q9UN75 941 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 GLI3P10071 1580 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 LRRC10BA6NIK2 292 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 PLCG2P16885 1265 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 HERVK_113P62684 666 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 USH1GQ495M9 461 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 C4orf32Q8N8J7 132 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 IPO4Q8TEX9 1081 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 REXO2Q9Y3B8 237 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 MYMKA6NI61 221 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 POLR2FP61218 127 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 SEPT11Q9NVA2 429 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 KIAA1024Q9UPX6 916 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 TAF1P21675 1872 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■□□□ 13.9
ACTN1-203ENST00000394419 SRGNP10124 158 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 KIF11P52732 1056 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 KCNB1Q14721 858 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 DCAF17Q5H9S7 520 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 AK8Q96MA6 479 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SPAG5Q96R06 1193 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MEIS1O00470 390 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 LAD1O00515 517 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SLC37A4O43826 429 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 KLRC4O43908 158 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 RNF40O75150 1001 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 AKR1B1P15121 316 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MCM3P25205 808 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 GFPT1Q06210 699 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 WDR59Q6PJI9 974 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 AMIGO3Q86WK7 504 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MYH6P13533 1939 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 HLTFQ14527 1009 aaKnown RBP eCLIP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 PSTPIP2Q9H939 334 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 TMEM51Q9NW97 253 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 L1RE1Q9UN81 338 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
ACTN1-203ENST00000394419 MYH8P13535 1937 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 NID2Q14112 1375 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 FLT1P17948 1338 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 PDS5AQ29RF7 1337 aaKnown RBP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 CLSTN1O94985 981 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 FGRP09769 529 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 KCTD19Q17RG1 926 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 LSM14BQ9BX40 385 aaKnown RBP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 PANK4Q9NVE7 773 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 NPHP3-ACAD11A0A0J9YXS1 232 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 E9PMD0 336 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 TUBB4BP68371 445 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
ACTN1-203ENST00000394419 GOLGA6BA6NDN3 693 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 FTCDO95954 541 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 APBA1Q02410 837 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 FAM26FQ5R3K3 315 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms