RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PHLPP1O60346 1717 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CDC25AP30304 524 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CCT6AP40227 531 aaKnown RBP20.86■□□□□ 0.93
HOXC6-202ENST00000394331 STX17P56962 302 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 GRIN1Q05586 938 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 EZH2Q15910 746 aaKnown RBP20.86■□□□□ 0.93
HOXC6-202ENST00000394331 OXER1Q8TDS5 423 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 KIF9Q9HAQ2 790 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 RWDD2AQ9UIY3 292 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CAPN11Q9UMQ6 739 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 PRPF3O43395 683 aaKnown RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 PECAM1P16284 738 aaPredicted RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 TCP1P17987 556 aaKnown RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 IFIT1BQ5T764 474 aaKnown RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 KLHL10Q6JEL2 608 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 NOD2Q9HC29 1040 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 GDF3Q9NR23 364 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 LAMB2P55268 1798 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 FRMD3A2A2Y4 597 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 TRAPPC3O43617 180 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 BMP15O95972 392 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 PAEPP09466 180 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 DPYDQ12882 1025 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 TSR1Q2NL82 804 aaKnown RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 TCP11X2Q5H9J9 407 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 IFT20Q8IY31 132 aa20.85■□□□□ 0.93
HOXC6-202ENST00000394331 LUC7L2Q9Y383 392 aaKnown RBP20.85■□□□□ 0.93
HOXC6-202ENST00000394331 EME2A4GXA9 379 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 ERFEQ4G0M1 354 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 WDR59Q6PJI9 974 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 NBPF5PQ86XG9 351 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 PIK3R5Q8WYR1 880 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 CORO1CQ9ULV4 474 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 TRPC6Q9Y210 931 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 C15orf41Q9Y2V0 281 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 FGRP09769 529 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 KRT2P35908 639 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 ELF3P78545 371 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 PAK2Q13177 524 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 CCDC43Q96MW1 224 aaKnown RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 TTC26A0AVF1 554 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 LRIG3Q6UXM1 1119 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 BZW1Q7L1Q6 419 aaKnown RBP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 SPAG5Q96R06 1193 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 AATFQ9NY61 560 aaKnown RBP eCLIP20.84■□□□□ 0.93
HOXC6-202ENST00000394331 MINPP1Q9UNW1 487 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 SH3BP1Q9Y3L3 701 aa20.84■□□□□ 0.93
HOXC6-202ENST00000394331 PPP1R12BO60237 982 aaPredicted RBP20.83■□□□□ 0.93
HOXC6-202ENST00000394331 IPO7O95373 1038 aaKnown RBP20.83■□□□□ 0.93
HOXC6-202ENST00000394331 ADAMTS2O95450 1211 aa20.83■□□□□ 0.93
HOXC6-202ENST00000394331 SEMA3FQ13275 785 aa20.83■□□□□ 0.93
HOXC6-202ENST00000394331 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
HOXC6-202ENST00000394331 CSRNP2Q9H175 543 aa20.83■□□□□ 0.93
HOXC6-202ENST00000394331 SLC39A2Q9NP94 309 aa20.83■□□□□ 0.93
HOXC6-202ENST00000394331 SMNDC1O75940 238 aaKnown RBP eCLIP20.83■□□□□ 0.92
HOXC6-202ENST00000394331 GSTA1P08263 222 aa20.83■□□□□ 0.92
HOXC6-202ENST00000394331 FUT2Q10981 343 aa20.83■□□□□ 0.92
HOXC6-202ENST00000394331 PDCD2Q16342 344 aaPredicted RBP20.83■□□□□ 0.92
HOXC6-202ENST00000394331 PKN1Q16512 942 aa20.83■□□□□ 0.92
HOXC6-202ENST00000394331 CCT6BQ92526 530 aa20.83■□□□□ 0.92
HOXC6-202ENST00000394331 FAM84BQ96KN1 310 aaPredicted RBP20.83■□□□□ 0.92
HOXC6-202ENST00000394331 CPSF2Q9P2I0 782 aaKnown RBP20.83■□□□□ 0.92
HOXC6-202ENST00000394331 RGL2O15211 777 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 RPSAP08865 295 aaKnown RBP20.82■□□□□ 0.92
HOXC6-202ENST00000394331 CDK17Q00537 523 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 CAPRIN2Q6IMN6 1127 aaKnown RBP20.82■□□□□ 0.92
HOXC6-202ENST00000394331 MIS18BP1Q6P0N0 1132 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 CACNA2D3Q8IZS8 1091 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 WHAMMQ8TF30 809 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 NSMCE1Q8WV22 266 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 PAGE5Q96GU1 130 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 SEC16BQ96JE7 1060 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 VPS54Q9P1Q0 977 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 KCNJ18B7U540 433 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 BUB1BO60566 1050 aaPredicted RBP20.82■□□□□ 0.92
HOXC6-202ENST00000394331 DDAH1O94760 285 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 DYNLL1P63167 89 aaKnown RBP20.82■□□□□ 0.92
HOXC6-202ENST00000394331 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 SPRED3Q2MJR0 410 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 LACRTQ9GZZ8 138 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 SLC12A6Q9UHW9 1150 aa20.82■□□□□ 0.92
HOXC6-202ENST00000394331 SSBP05455 408 aaKnown RBP eCLIP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 MSL1Q68DK7 614 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 C8orf74Q6P047 294 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 FAM43BQ6ZT52 329 aaPredicted RBP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 VPS16Q9H269 839 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 TMBIM4Q9HC24 238 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 CTNND2Q9UQB3 1225 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 LEMD3Q9Y2U8 911 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 HYOU1Q9Y4L1 999 aa20.81■□□□□ 0.92
HOXC6-202ENST00000394331 V9GY48 417 aaPredicted RBP20.81■□□□□ 0.92
HOXC6-202ENST00000394331 COL1A1P02452 1464 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms