RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PUS3Q9BZE2 481 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PLEKHA4Q9H4M7 779 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 SLITRK6Q9H5Y7 841 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 KCNK9Q9NPC2 374 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 ABCB11O95342 1321 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 KIF3CO14782 793 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 HNRNPH1P31943 449 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PPP2R2AP63151 447 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 FOXO4P98177 505 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PLIN2Q99541 437 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 CTDP1Q9Y5B0 961 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 FAM107AO95990 144 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 FERP16591 822 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 RNASELQ05823 741 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 TMTC3Q6ZXV5 915 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 YTHDF3Q7Z739 585 aaKnown RBP9.45□□□□□ -0.9
GABRA1-202ENST00000393943 VSIG1Q86XK7 387 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 NFU1Q9UMS0 254 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 PLAAQ9Y263 795 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 C3P01024 1663 aa9.45□□□□□ -0.9
GABRA1-202ENST00000393943 BUB1O43683 1085 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ATP5HO75947 161 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 DESP17661 470 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 LMNB1P20700 586 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ELF1P32519 619 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 STAT1P42224 750 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 PRCPP42785 496 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 SMTNP53814 917 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ANTXR2P58335 489 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 EHHADHQ08426 723 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 NOA1Q8NC60 698 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 IGDCC4Q8TDY8 1250 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 MICAL1Q8TDZ2 1067 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 STMN2Q93045 179 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ADCY7P51828 1080 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 APLFQ8IW19 511 aaPredicted RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ADSSL1Q8N142 457 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 NEK9Q8TD19 979 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 FRMD4BQ9Y2L6 1034 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 PRAMEF22A3QJZ6 481 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 CTNND1O60716 968 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 TEX11Q8IYF3 940 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 GRK7Q8WTQ7 553 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ZNF473Q8WTR7 871 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 PSMD1Q99460 953 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 NEDD4P46934 1319 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 FOXN1O15353 648 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 GAS8O95995 478 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 XRCC5P13010 732 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 SKOR1P84550 965 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 CUL4BQ13620 913 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 FAM26FQ5R3K3 315 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 LARP4BQ92615 738 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 CCSER1Q9C0I3 900 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 TXLNGQ9NUQ3 528 aa9.44□□□□□ -0.9
GABRA1-202ENST00000393943 LARSQ9P2J5 1176 aaKnown RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 ARMCX3Q9UH62 379 aaPredicted RBP9.44□□□□□ -0.9
GABRA1-202ENST00000393943 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 LRRD1A4D1F6 860 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 BCRP11274 1271 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 LSP1P33241 339 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 TXKP42681 527 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 MCAMP43121 646 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PHKA1P46020 1223 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PDE6CP51160 858 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ATP2B2Q01814 1243 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 EIF1ADQ8N9N8 165 aaKnown RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ZBTB9Q96C00 473 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 SOS2Q07890 1332 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 RHOBTB3O94955 611 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 CLTAP09496 248 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 POLR2FP61218 127 aaKnown RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 CCT8L2Q96SF2 557 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 FMO2Q99518 471 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 DAAM1Q9Y4D1 1078 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 IKBKGQ9Y6K9 419 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PASKQ96RG2 1323 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms