RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 WWC2Q6AWC2 1192 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 IQSEC1Q6DN90 963 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 FBXO16Q8IX29 292 aaPredicted RBP21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 SMARCC2Q8TAQ2 1214 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 SLC26A6Q9BXS9 759 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 RNF26Q9BY78 433 aaPredicted RBP21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 PXMP2Q9NR77 195 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 PIK3CDO00329 1044 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 PFKFB2O60825 505 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 SCG2P13521 617 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 EIF2AK2P19525 551 aaKnown RBP21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 SSRP1Q08945 709 aaKnown RBP21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 STXBP2Q15833 593 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 TAPT1Q6NXT6 567 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 PPP1R18Q6NYC8 613 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 TRIM22Q8IYM9 498 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 KIF2CQ99661 725 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 XPNPEP3Q9NQH7 507 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
PDLIM7-204ENST00000393546 STXBP3O00186 592 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 MEIS2O14770 477 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 DUSP11O75319 330 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 NR3C2P08235 984 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 TNFAIP2Q03169 654 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 USP17L6PQ6QN14 398 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 NOL8Q76FK4 1167 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 NECAB2Q7Z6G3 386 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 BACH2Q9BYV9 841 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 PDGFCQ9NRA1 345 aa21.85■■□□□ 1.09
PDLIM7-204ENST00000393546 CDKL5O76039 1030 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 MYCNP04198 464 aaPredicted RBP21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 ADCYAP1R1P41586 468 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 SCRN1Q12765 414 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 PKN1Q16512 942 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 TEX2Q8IWB9 1127 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 PAWRQ96IZ0 340 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 PDCD2LQ9BRP1 358 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 GLT8D2Q9H1C3 349 aa21.84■■□□□ 1.09
PDLIM7-204ENST00000393546 BRCA2P51587 3418 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 RBM47A0AV96 593 aaKnown RBP21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 SMCO2A6NFE2 343 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 PPFIA3O75145 1194 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 EIF3JO75822 258 aaKnown RBP21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 MYCLP12524 364 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 UBE2Q1Q7Z7E8 422 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 RNF180Q86T96 592 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 CCDC12Q8WUD4 166 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 WDR11Q9BZH6 1224 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 RIC8AQ9NPQ8 531 aa21.83■■□□□ 1.09
PDLIM7-204ENST00000393546 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 KBTBD13C9JR72 458 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 DNM1LO00429 736 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 PGK1P00558 417 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 CCND2P30279 289 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 ADCY7P51828 1080 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 PGM5Q15124 567 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 RABEP1Q15276 862 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 LRRC41Q15345 812 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 ME3Q16798 604 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 GJC2Q5T442 439 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 TYW1BQ6NUM6 668 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 VSIG10LQ86VR7 867 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 LENG1Q96BZ8 264 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 C11orf49Q9H6J7 331 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 LIMCH1Q9UPQ0 1083 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 FRMPD3Q5JV73 1810 aa21.82■■□□□ 1.08
PDLIM7-204ENST00000393546 SPDYE3A6NKU9 549 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 DEXIO95424 95 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 SMPD1P17405 629 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 UBE2SQ16763 222 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 NECAB1Q8N987 351 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 IL27Q8NEV9 243 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 DIS3LQ8TF46 1054 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 SCFD2Q8WU76 684 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 TBC1D32Q96NH3 1257 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 AP5M1Q9H0R1 490 aa21.81■■□□□ 1.08
PDLIM7-204ENST00000393546 ADCY6O43306 1168 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 GJA9P57773 515 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 TTLL4Q14679 1199 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 DUSP28Q4G0W2 176 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 SEPT14Q6ZU15 432 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 C6orf50Q9HD87 102 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 Q9Y3F1 56 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 SYNRGQ9UMZ2 1314 aa21.8■■□□□ 1.08
PDLIM7-204ENST00000393546 ESYT2A0FGR8 921 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 NKRFO15226 690 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 DYNC1LI2O43237 492 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 ADAMTS4O75173 837 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 FOSP01100 380 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 C6orf222P0C671 652 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 XRRA1Q6P2D8 792 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 CCDC148Q8NFR7 591 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 GTF3C6Q969F1 213 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 ZSCAN31Q96LW9 406 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 ZMYND12Q9H0C1 365 aa21.79■■□□□ 1.08
PDLIM7-204ENST00000393546 UPF3AQ9H1J1 476 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms