RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 WHAMMQ8TF30 809 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SNX19Q92543 992 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 MRRFQ96E11 262 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 ACCSQ96QU6 501 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■□□□□ 9.6
UBR3-202ENST00000392632 LZTFL1Q9NQ48 299 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 KLHL14Q9P2G3 628 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SUN2Q9UH99 717 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SEPT9Q9UHD8 586 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 LSM7Q9UK45 103 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 CTNND2Q9UQB3 1225 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ZNF148Q9UQR1 794 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 ZFYVE9O95405 1425 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 EIF4G3O43432 1585 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 TXNDC9O14530 226 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 GSTA4O15217 222 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 SGSM2O43147 1006 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PRDM1O75626 825 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DDAH1O94760 285 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 MYO1DO94832 1006 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DLATP10515 647 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 NPR1P16066 1061 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ADCY8P40145 1251 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KYAT1Q16773 422 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 HSP90AA4PQ58FG1 418 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RAPH1Q70E73 1250 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DYMQ7RTS9 669 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 POTEDQ86YR6 584 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 HOMEZQ8IX15 550 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 TSC1Q92574 1164 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 SH3KBP1Q96B97 665 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ASIC4Q96FT7 647 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DDX27Q96GQ7 796 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 USP26Q9BXU7 913 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DNAJC25Q9H1X3 360 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 VPS16Q9H269 839 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RPF1Q9H9Y2 349 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 GDPD2Q9HCC8 539 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 AAASQ9NRG9 546 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CHCHD3Q9NX63 227 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 SELENONQ9NZV5 590 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 USP17L12C9JPN9 530 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KLRF2D3W0D1 207 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 USP17L21D6R901 530 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RASGRF2O14827 1237 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 MCF2LO15068 1137 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RGS16O15492 202 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 OR52Z1P0C646 297 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 GRIN1Q05586 938 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 POLA2Q14181 598 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 LONRF2Q1L5Z9 754 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CWF19L2Q2TBE0 894 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 Q3C1V9 767 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ANKRD20A4Q4UJ75 823 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ANKRD20A8PQ5CZ79 823 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 FAM26FQ5R3K3 315 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ANKRD20A2Q5SQ80 823 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ANKRD20A1Q5TYW2 823 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 LRCH2Q5VUJ6 765 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 NELFCDQ8IXH7 590 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 BLIDQ8IZY5 108 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CCNYQ8ND76 341 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PNMA1Q8ND90 353 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CABS1Q96KC9 395 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 TCEANC2Q96MN5 208 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 EYA1Q99502 592 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 COPRSQ9NQ92 184 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KMT5AQ9NQR1 393 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 IFNKQ9P0W0 207 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PI4KBQ9UBF8 816 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 FAM83GA6ND36 823 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 LRRIQ3A6PVS8 624 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 NDUFAB1O14561 156 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 SERPINB2P05120 415 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 BMP3P12645 472 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 TAC1P20366 129 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PHKA2P46019 1235 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RNASE9P60153 205 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 TIMM10P62072 90 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 MYL7Q01449 175 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CUL1Q13616 776 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RRM2BQ7LG56 351 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 RNF10Q8N5U6 811 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 ACRBPQ8NEB7 543 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 TRIM58Q8NG06 486 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 MTBPQ96DY7 904 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ZNF274Q96GC6 653 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 MTRQ99707 1265 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ZNF341Q9BYN7 854 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 BICC1Q9H694 974 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 EFCC1Q9HA90 598 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KIAA1586Q9HCI6 787 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 STX18Q9P2W9 335 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 SLC4A7Q9Y6M7 1214 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PASKQ96RG2 1323 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PIK3C2GO75747 1445 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PI4K2BG5E9Z4 385 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 BNIP3LO60238 219 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms