RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ADSSL1Q8N142 457 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 CCDC112Q8NEF3 446 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 CRYGNQ8WXF5 182 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 PRR12Q9ULL5 1215 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 SPAG1Q07617 926 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 GRB10Q13322 594 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 STIM1Q13586 685 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 KRT79Q5XKE5 535 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 GIMAP8Q8ND71 665 aaPredicted RBP22.54■■□□□ 1.2
PTPN11-202ENST00000392597 ACER1Q8TDN7 264 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 HAS1Q92839 578 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 PRIMPOLQ96LW4 560 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 TPM2P07951 284 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 PPP1R2P41236 205 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 PRCPP42785 496 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 TBX2Q13207 712 aaPredicted RBP22.53■■□□□ 1.2
PTPN11-202ENST00000392597 TPD52L1Q16890 204 aaPredicted RBP22.53■■□□□ 1.2
PTPN11-202ENST00000392597 NBPF9Q3BBW0 867 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 HSP90AA4PQ58FG1 418 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 SPECC1LQ69YQ0 1117 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 CHURC1Q8WUH1 139 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 NELFBQ8WX92 580 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 CDK5RAP3Q96JB5 506 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 VCPKMTQ9H867 229 aa22.53■■□□□ 1.2
PTPN11-202ENST00000392597 HOXA7P31268 230 aaPredicted RBP22.52■■□□□ 1.2
PTPN11-202ENST00000392597 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
PTPN11-202ENST00000392597 SV2BQ7L1I2 683 aa22.52■■□□□ 1.2
PTPN11-202ENST00000392597 SPICE1Q8N0Z3 855 aa22.52■■□□□ 1.2
PTPN11-202ENST00000392597 KCNMB3Q9NPA1 279 aa22.52■■□□□ 1.2
PTPN11-202ENST00000392597 GDAQ9Y2T3 454 aa22.52■■□□□ 1.2
PTPN11-202ENST00000392597 PIK3CDO00329 1044 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 ASNSP08243 561 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 TMEM119Q4V9L6 283 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 DPY19L2Q6NUT2 758 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 CNNM4Q6P4Q7 775 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 PNMA5Q96PV4 448 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 LRRC27Q9C0I9 530 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 ADD3Q9UEY8 706 aaKnown RBP22.51■■□□□ 1.19
PTPN11-202ENST00000392597 PCDHA12Q9UN75 941 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 LRRC10BA6NIK2 292 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 H7C1D1 291 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 SREBF1P36956 1147 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 ARHGAP4P98171 946 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 FILIP1LQ4L180 1135 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 COBLL1Q53SF7 1204 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 FAM160B2Q86V87 743 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 CDAN1Q8IWY9 1227 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 SLFN12Q8IYM2 578 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 SNX29Q8TEQ0 813 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 BLOC1S4Q9NUP1 217 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 EXOC1Q9NV70 894 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 LIMA1Q9UHB6 759 aaKnown RBP22.51■■□□□ 1.19
PTPN11-202ENST00000392597 GJA3Q9Y6H8 435 aa22.51■■□□□ 1.19
PTPN11-202ENST00000392597 POTEMA6NI47 508 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 SPDYE3A6NKU9 549 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 PSMA7O14818 248 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 TBX3O15119 743 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 MARCH6O60337 910 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 USH1GQ495M9 461 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 KIAA1755Q5JYT7 1200 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 HYIQ5T013 277 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 LARP4BQ92615 738 aaKnown RBP22.5■■□□□ 1.19
PTPN11-202ENST00000392597 DHTKD1Q96HY7 919 aaPredicted RBP22.5■■□□□ 1.19
PTPN11-202ENST00000392597 TMX1Q9H3N1 280 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 GINM1Q9NU53 330 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 KDM3AQ9Y4C1 1321 aa22.5■■□□□ 1.19
PTPN11-202ENST00000392597 SNAP25P60880 206 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 ASIC1P78348 528 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 FAM83BQ5T0W9 1011 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 MIGA2Q7L4E1 593 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 PVALEFA0A1B0GWK0 134 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 RASA3Q14644 834 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 Q4G0T1 1027 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 ANKRD20A12PQ8NF67 263 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 RAD54LQ92698 747 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 NT5C3AQ9H0P0 336 aa22.49■■□□□ 1.19
PTPN11-202ENST00000392597 RANBP17Q9H2T7 1088 aaKnown RBP22.49■■□□□ 1.19
PTPN11-202ENST00000392597 GLTPD2A6NH11 291 aa22.48■■□□□ 1.19
PTPN11-202ENST00000392597 OPLAHO14841 1288 aa22.48■■□□□ 1.19
PTPN11-202ENST00000392597 CIITAP33076 1130 aa22.48■■□□□ 1.19
PTPN11-202ENST00000392597 CCAR2Q8N163 923 aaKnown RBP22.48■■□□□ 1.19
PTPN11-202ENST00000392597 FEM1BQ9UK73 627 aa22.48■■□□□ 1.19
PTPN11-202ENST00000392597 ATAD5Q96QE3 1844 aa22.48■■□□□ 1.19
PTPN11-202ENST00000392597 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
PTPN11-202ENST00000392597 PBX1P40424 430 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 GMPSP49915 693 aaPredicted RBP22.47■■□□□ 1.19
PTPN11-202ENST00000392597 PDE4DQ08499 809 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 NOC3LQ8WTT2 800 aaKnown RBP22.47■■□□□ 1.19
PTPN11-202ENST00000392597 SHTN1A0MZ66 631 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 PHF20L1A8MW92 1017 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 CYP3A4P08684 503 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 TCP11X2Q5H9J9 407 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 TEPSINQ96N21 525 aa22.47■■□□□ 1.19
PTPN11-202ENST00000392597 P2RX7Q99572 595 aaKnown RBP22.47■■□□□ 1.19
PTPN11-202ENST00000392597 MCM6Q14566 821 aa22.46■■□□□ 1.19
PTPN11-202ENST00000392597 KRT31Q15323 416 aa22.46■■□□□ 1.19
PTPN11-202ENST00000392597 UNC13DQ70J99 1090 aa22.46■■□□□ 1.19
PTPN11-202ENST00000392597 ETNPPLQ8TBG4 499 aa22.46■■□□□ 1.19
PTPN11-202ENST00000392597 L3MBTL3Q96JM7 780 aaPredicted RBP22.46■■□□□ 1.19
PTPN11-202ENST00000392597 THAP9Q9H5L6 903 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms