RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 DRC7Q8IY82 874 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 WRNIP1Q96S55 665 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 SMCHD1A6NHR9 2005 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 DDNO94850 711 aaPredicted RBP24.03■■□□□ 1.44
SPHK1-202ENST00000392496 RPN1P04843 607 aaKnown RBP24.03■■□□□ 1.44
SPHK1-202ENST00000392496 CYP3A4P08684 503 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 LDHDQ86WU2 507 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 PLIN2Q99541 437 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 PICK1Q9NRD5 415 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 ADARB2Q9NS39 739 aaKnown RBP24.03■■□□□ 1.44
SPHK1-202ENST00000392496 STK17AQ9UEE5 414 aa24.03■■□□□ 1.44
SPHK1-202ENST00000392496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.03■■□□□ 1.44
SPHK1-202ENST00000392496 GCOM1H8Y6P7 765 aaPredicted RBP24.02■■□□□ 1.44
SPHK1-202ENST00000392496 TBX3O15119 743 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 ICAM1P05362 532 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 POLR2MP0CAP2 368 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 HOXA13P31271 388 aaPredicted RBP24.02■■□□□ 1.44
SPHK1-202ENST00000392496 FMR1Q06787 632 aaKnown RBP eCLIP24.02■■□□□ 1.44
SPHK1-202ENST00000392496 SUPT20HL1Q3ZLR7 823 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 KRT79Q5XKE5 535 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 SLFN12Q8IYM2 578 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 LRRC15Q8TF66 581 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 PCDHA12Q9UN75 941 aa24.02■■□□□ 1.44
SPHK1-202ENST00000392496 SLC26A4O43511 780 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 GRB10Q13322 594 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 KCNB1Q14721 858 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 PRAMEF18Q5VWM3 479 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 EMILIN3Q9NT22 766 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 IQCA1LA6NCM1 817 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 POTEMA6NI47 508 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 CFBP00751 764 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 PTPRAP18433 802 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 BACE1P56817 501 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 AMPD3Q01432 767 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 MTMR2Q13614 643 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF658Q5TYW1 1059 aaPredicted RBP24.01■■□□□ 1.43
SPHK1-202ENST00000392496 KLRG1Q96E93 195 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 PNMA5Q96PV4 448 aa24.01■■□□□ 1.43
SPHK1-202ENST00000392496 PPP1R3GB7ZBB8 358 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 VCAM1P19320 739 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 FANCCQ00597 558 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 SPP2Q13103 211 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF280CQ8ND82 737 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 SNX29Q8TEQ0 813 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 ZKSCAN4Q969J2 545 aaPredicted RBP24■■□□□ 1.43
SPHK1-202ENST00000392496 CDK5RAP3Q96JB5 506 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 C7orf25Q9BPX7 421 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 EHMT1Q9H9B1 1298 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 FANCLQ9NW38 375 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF536O15090 1300 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 SSC5DA1L4H1 1573 aa24■■□□□ 1.43
SPHK1-202ENST00000392496 CD44P16070 742 aaKnown RBP23.99■■□□□ 1.43
SPHK1-202ENST00000392496 CLCN1P35523 988 aa23.99■■□□□ 1.43
SPHK1-202ENST00000392496 NOL9Q5SY16 702 aaKnown RBP23.99■■□□□ 1.43
SPHK1-202ENST00000392496 SAMD1Q6SPF0 538 aaPredicted RBP23.99■■□□□ 1.43
SPHK1-202ENST00000392496 ETNPPLQ8TBG4 499 aa23.99■■□□□ 1.43
SPHK1-202ENST00000392496 IFNKQ9P0W0 207 aa23.99■■□□□ 1.43
SPHK1-202ENST00000392496 PNMA2Q9UL42 364 aa23.99■■□□□ 1.43
SPHK1-202ENST00000392496 CCPG1Q9ULG6 757 aa23.99■■□□□ 1.43
SPHK1-202ENST00000392496 FDX1P10109 184 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 TMEM119Q4V9L6 283 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 FCHSD1Q86WN1 690 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 TBC1D5Q92609 795 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 LENG9Q96B70 501 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 MED15Q96RN5 788 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 TANGO6Q9C0B7 1094 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 XPO4Q9C0E2 1151 aaKnown RBP23.98■■□□□ 1.43
SPHK1-202ENST00000392496 SLC38A10Q9HBR0 1119 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 PPP1R9AQ9ULJ8 1098 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 NFE2L3Q9Y4A8 694 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 POLR2AP24928 1970 aaKnown RBP23.98■■□□□ 1.43
SPHK1-202ENST00000392496 PHIPQ8WWQ0 1821 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 CBFA2T2O43439 604 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 KLRC4O43908 158 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 ATP1A3P13637 1013 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 PRR16Q569H4 304 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 HYIQ5T013 277 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 C12orf42Q96LP6 360 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 FAM20AQ96MK3 541 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 BLOC1S4Q9NUP1 217 aa23.98■■□□□ 1.43
SPHK1-202ENST00000392496 KDM3AQ9Y4C1 1321 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 C19orf81C9J6K1 198 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 FAM86B1E9PN63 330 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 FAM86B2P0C5J1 330 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF18P17022 549 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 SV2BQ7L1I2 683 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 CCDC186Q7Z3E2 898 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 L3MBTL3Q96JM7 780 aaPredicted RBP23.97■■□□□ 1.43
SPHK1-202ENST00000392496 AGBL1Q96MI9 1066 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 TRIM9Q9C026 710 aa23.97■■□□□ 1.43
SPHK1-202ENST00000392496 RPAP3Q9H6T3 665 aaPredicted RBP23.97■■□□□ 1.43
SPHK1-202ENST00000392496 SYNRGQ9UMZ2 1314 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 FLOT1O75955 427 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 RHOBTB3O94955 611 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 DGKZQ13574 1117 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 KMT5BQ4FZB7 885 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 SPATA1Q5VX52 437 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 TRMT44Q8IYL2 757 aaKnown RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 CCDC47Q96A33 483 aaKnown RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 NUDT12Q9BQG2 462 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms