RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TLK1Q9UKI8 766 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 H0YIN7 160 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 ITKQ08881 620 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 DTX3LQ8TDB6 740 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 INTS9Q9NV88 658 aaKnown RBP15.96■□□□□ 0.15
CCDC50-201ENST00000392455 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
CCDC50-201ENST00000392455 KRT7P08729 469 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 KIRREL3Q8IZU9 778 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 IRAK4Q9NWZ3 460 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 IFNB1P01574 187 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 TAC1P20366 129 aa15.96■□□□□ 0.14
CCDC50-201ENST00000392455 CARSP49589 748 aaKnown RBP15.96■□□□□ 0.14
CCDC50-201ENST00000392455 PRAG1Q86YV5 1406 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 DYMQ7RTS9 669 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 TADA1Q96BN2 335 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 DACH2Q96NX9 599 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 ALS2CLQ60I27 953 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 SESTD1Q86VW0 696 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 SNX29Q8TEQ0 813 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 DBNLQ9UJU6 430 aaKnown RBP15.95■□□□□ 0.14
CCDC50-201ENST00000392455 MCF2LO15068 1137 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 BFSP1Q12934 665 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
CCDC50-201ENST00000392455 BSPRYQ5W0U4 402 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 PPARDQ03181 441 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 ACBD5Q5T8D3 534 aaPredicted RBP15.95■□□□□ 0.14
CCDC50-201ENST00000392455 C19orf60Q96EN9 201 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 DRP2Q13474 957 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 PLEKHM3Q6ZWE6 761 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 GPIHBP1Q8IV16 184 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 JPH2Q9BR39 696 aaPredicted RBP15.95■□□□□ 0.14
CCDC50-201ENST00000392455 CARD6Q9BX69 1037 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 GNGT1P63211 74 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
CCDC50-201ENST00000392455 WDR64B1ANS9 1081 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 MAPK13O15264 365 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 NLRP12P59046 1061 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 APLFQ8IW19 511 aaPredicted RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 KDM4CQ9H3R0 1056 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 EYA2O00167 538 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 POSTNQ15063 836 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 NR1H3Q13133 447 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ANKRD42Q8N9B4 389 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 BCAS4Q8TDM0 211 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 IP6K1Q92551 441 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 PRDM1O75626 825 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 CPP00450 1065 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 KRR1Q13601 381 aaKnown RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 GALNT17Q6IS24 598 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ZMYND8Q9ULU4 1186 aaPredicted RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 HGSO14964 777 aaPredicted RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 KRT16P08779 473 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 NLRX1Q86UT6 975 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 KLHL7Q8IXQ5 586 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 FAM170AA1A519 330 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ATP2B4P23634 1241 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 MRPS15P82914 257 aaKnown RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 ANLNQ9NQW6 1124 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
CCDC50-201ENST00000392455 STK17AQ9UEE5 414 aa15.94■□□□□ 0.14
CCDC50-201ENST00000392455 CAPRIN1Q14444 709 aaKnown RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 NELFBQ8WX92 580 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 NUP160Q12769 1436 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 FANCCQ00597 558 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 HERC4Q5GLZ8 1057 aaPredicted RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 C4orf50Q6ZRC1 276 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 APPBP2Q92624 585 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 MYL10Q9BUA6 226 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 MAFGO15525 162 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 CIITAP33076 1130 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 SYTL2Q9HCH5 934 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 A0A1W2PP64 1363 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 DEAF1O75398 565 aaPredicted RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 ESRRBO95718 433 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 HLA-DPA1P20036 260 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 KRT33BQ14525 404 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 ST13P5Q8NFI4 369 aaPredicted RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 OR8K1Q8NGG5 319 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 TGFBRAP1Q8WUH2 860 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 ZFYVE1Q9HBF4 777 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 CFBP00751 764 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 ANGPT1Q15389 498 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 KAZNQ674X7 775 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
CCDC50-201ENST00000392455 RAB14P61106 215 aa15.93■□□□□ 0.14
CCDC50-201ENST00000392455 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.142e-7■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms