RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 NCOA5Q9HCD5 579 aaKnown RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 HMX1Q9NP08 348 aaPredicted RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SH3GLB2Q9NR46 395 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ZNF236Q9UL36 1845 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ESYT2A0FGR8 921 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 SOWAHBA6NEL2 793 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 OPLAHO14841 1288 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 MSCO60682 206 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 FOSP01100 380 aaPredicted RBP7.78□□□□□ -1.16
UBBP1-201ENST00000392399 XBP1P17861 261 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 GNA11P29992 359 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 NAPAP54920 295 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 CNTN2Q02246 1040 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 CACNB2Q08289 660 aaPredicted RBP7.78□□□□□ -1.16
UBBP1-201ENST00000392399 PKN1Q16512 942 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 WWC2Q6AWC2 1192 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 HEATR3Q7Z4Q2 680 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 BICD2Q8TD16 824 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 SYTL5Q8TDW5 730 aaPredicted RBP7.78□□□□□ -1.16
UBBP1-201ENST00000392399 MORC4Q8TE76 937 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 WASF1Q92558 559 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 TBC1D5Q92609 795 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 PHKBQ93100 1093 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 RMDN3Q96TC7 470 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 LLPHQ9BRT6 129 aaKnown RBP7.78□□□□□ -1.16
UBBP1-201ENST00000392399 FLRT1Q9NZU1 646 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 CNPY2Q9Y2B0 182 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 ZNFX1Q9P2E3 1918 aaKnown RBP7.78□□□□□ -1.16
UBBP1-201ENST00000392399 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
UBBP1-201ENST00000392399 hCG_1642624A0A1W2PR95 340 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SMCO2A6NFE2 343 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 STXBP3O00186 592 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 MEIS2O14770 477 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 STAM2O75886 525 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SNAI1O95863 264 aaPredicted RBP7.77□□□□□ -1.17
UBBP1-201ENST00000392399 GJB1P08034 283 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 CCL5P13501 91 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 EDNRBP24530 442 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 CYP2C19P33261 490 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ALDH5A1P51649 535 aaPredicted RBP7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ACVR2BQ13705 512 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 STXBP2Q15833 593 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ARHGEF16Q5VV41 709 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 GALNT17Q6IS24 598 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 XRRA1Q6P2D8 792 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SLC30A10Q6XR72 485 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ARMCX2Q7L311 632 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 CCDC148Q8NFR7 591 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SMARCC2Q8TAQ2 1214 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SPOCK2Q92563 424 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 FGD4Q96M96 766 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 TAAR1Q96RJ0 339 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ZMYND12Q9H0C1 365 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 RNF208Q9H0X6 261 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 C6orf50Q9HD87 102 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 VTA1Q9NP79 307 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 RIC8AQ9NPQ8 531 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 PAK6Q9NQU5 681 aaPredicted RBP7.77□□□□□ -1.17
UBBP1-201ENST00000392399 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.77□□□□□ -1.17
UBBP1-201ENST00000392399 COLQQ9Y215 455 aaPredicted RBP7.77□□□□□ -1.17
UBBP1-201ENST00000392399 SMCHD1A6NHR9 2005 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 ZSWIM8A7E2V4 1837 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 PLXNB2O15031 1838 aa7.77□□□□□ -1.17
UBBP1-201ENST00000392399 MYH6P13533 1939 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 SEPT4O43236 478 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 EIF3JO75822 258 aaKnown RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 LARGE1O95461 756 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 CTDNEP1O95476 244 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 NR3C2P08235 984 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 ZNF865P0CJ78 1059 aaPredicted RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 CYBAP13498 195 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 TAL1P17542 331 aaPredicted RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 ADCY7P51828 1080 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 HMGN5P82970 282 aaKnown RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 PDE4DQ08499 809 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 AP3B2Q13367 1082 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 MTFR1Q15390 333 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 IQSEC1Q6DN90 963 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 KCNV1Q6PIU1 500 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 NOL8Q76FK4 1167 aaKnown RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 NECAB1Q8N987 351 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 GPKOWQ92917 476 aaPredicted RBP eCLIP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 TMX3Q96JJ7 454 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 PDCD2LQ9BRP1 358 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 SCUBE2Q9NQ36 999 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 PXMP2Q9NR77 195 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 ORC3Q9UBD5 711 aaPredicted RBP7.76□□□□□ -1.17
UBBP1-201ENST00000392399 FAM184BQ9ULE4 1060 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 KIF3AQ9Y496 699 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 ASTN1O14525 1302 aa7.76□□□□□ -1.17
UBBP1-201ENST00000392399 KIAA0100Q14667 2235 aaKnown RBP7.75□□□□□ -1.17
UBBP1-201ENST00000392399 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
UBBP1-201ENST00000392399 CCDC85CA6NKD9 419 aa7.75□□□□□ -1.17
UBBP1-201ENST00000392399 SGPL1O95470 568 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms