RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 PDE4DQ08499 809 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 FUT2Q10981 343 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 CCDC62Q6P9F0 684 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 TLK2Q86UE8 772 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 RMDN3Q96TC7 470 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 A0A1W2PPC1 479 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 CFBP00751 764 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 RXRAP19793 462 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 MAGEA10P43363 369 aaPredicted RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 RCAN1P53805 252 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 BEX3Q00994 111 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 TLE2Q04725 743 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 TMTC3Q6ZXV5 915 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 TOX2Q96NM4 488 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 MPHOSPH6Q99547 160 aaKnown RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
IGHV4-28-201ENST00000390612 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 NKRFO15226 690 aaKnown RBP eCLIP13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 ARIH2O95376 493 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 NR3C2P08235 984 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 CPA1P15085 419 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 STXBP2Q15833 593 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 GLT1D1Q96MS3 346 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
IGHV4-28-201ENST00000390612 TRIM43BA6NCK2 446 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 ARVCFO00192 962 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 KIAA0355O15063 1070 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 CABYRO75952 493 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 RGS20O76081 388 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 EVCP57679 992 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 NID2Q14112 1375 aa13.17□□□□□ -0.3
IGHV4-28-201ENST00000390612 A6NJR5 290 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 MEIS2O14770 477 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 ZBTB43O43298 467 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 SLC34A2O95436 690 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 PGM5Q15124 567 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 COPS5Q92905 334 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
IGHV4-28-201ENST00000390612 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 ZEB2O60315 1214 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 CD4P01730 458 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 CLTBP09497 229 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 ITGB8P26012 769 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 CDC27P30260 824 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 ARHGAP1Q07960 439 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms