RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 FRS2Q8WU20 508 aa0.73□□□□□ -2.29
TRAJ42-201ENST00000390495 ELMO3Q96BJ8 720 aa0.73□□□□□ -2.29
TRAJ42-201ENST00000390495 NEIL1Q96FI4 390 aaPredicted RBP0.73□□□□□ -2.29
TRAJ42-201ENST00000390495 JMJD8Q96S16 334 aa0.73□□□□□ -2.29
TRAJ42-201ENST00000390495 CACNA2D2Q9NY47 1150 aa0.73□□□□□ -2.29
TRAJ42-201ENST00000390495 KRTAP23-1A1A580 65 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 RTL8CO15255 209 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 TNFRSF21O75509 655 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 PCSK2P16519 638 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 PPP2R3AQ06190 1150 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 WASHC4Q2M389 1173 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 ERCC6LQ2NKX8 1250 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 BBS9Q3SYG4 887 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 LY6G5CQ5SRR4 150 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 LRP10Q7Z4F1 713 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 SULF2Q8IWU5 870 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 SH2D3CQ8N5H7 860 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 LINC00116Q8NCU8 138 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 STK35Q8TDR2 534 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 SNX29Q8TEQ0 813 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 LENG9Q96B70 501 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 MLST8Q9BVC4 326 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 ANTXR1Q9H6X2 564 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 METTL14Q9HCE5 456 aaKnown RBP0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 FTSJ1Q9UET6 329 aa0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 FCGBPQ9Y6R7 5405 aaPredicted RBP0.72□□□□□ -2.29
TRAJ42-201ENST00000390495 ZNF521Q96K83 1311 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 TP73O15350 636 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 SMAD6O43541 496 aaKnown RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 CELA3AP09093 270 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 ARNTP27540 789 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 ETF1P62495 437 aaKnown RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 TRIM26Q12899 539 aaPredicted RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 SLC9A5Q14940 896 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 SH2D6Q7Z4S9 175 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 THEMISQ8N1K5 641 aaPredicted RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 ABTB2Q8N961 1025 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 ENOX1Q8TC92 643 aaKnown RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 PROKR1Q8TCW9 393 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 SYTL5Q8TDW5 730 aaPredicted RBP0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 ZNF384Q8TF68 577 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 OR14A2Q96R54 314 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 WNT10AQ9GZT5 417 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 PRM3Q9NNZ6 103 aa0.71□□□□□ -2.3
TRAJ42-201ENST00000390495 TADA3O75528 432 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 SYPP08247 313 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 MAPK8P45983 427 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 CRHR2Q13324 411 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 NBPF6Q5VWK0 638 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 RHOUQ7L0Q8 258 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 DTX3Q8N9I9 347 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 TCTN2Q96GX1 697 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 NBPF4Q96M43 638 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 EMILIN2Q9BXX0 1053 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 ASCC2Q9H1I8 757 aaPredicted RBP0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 CYP4F11Q9HBI6 524 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 RXFP1Q9HBX9 757 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 PDLIM7Q9NR12 457 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 ERVK13-1Q9NX77 482 aa0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 CCDC9Q9Y3X0 531 aaKnown RBP0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 TP53BP1Q12888 1972 aaPredicted RBP0.7□□□□□ -2.3
TRAJ42-201ENST00000390495 MATN4O95460 622 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 IGLV2-14P01704 120 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 POLR3DP05423 398 aaPredicted RBP0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 TAP1Q03518 808 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 ZNF252P-AS1Q0IIN9 211 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 RRP1BQ14684 758 aaKnown RBP0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 SGMS1Q86VZ5 419 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 IFNL2Q8IZJ0 200 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 SYNE4Q8N205 404 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 DPH2Q9BQC3 489 aaPredicted RBP0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 HDAC8Q9BY41 377 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 EBF3Q9H4W6 596 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 SNRKQ9NRH2 765 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 TMEM39AQ9NV64 488 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 GPN3Q9UHW5 284 aaPredicted RBP0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 FOXD3Q9UJU5 478 aaPredicted RBP0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 PCDHAC2Q9Y5I4 1007 aa0.69□□□□□ -2.3
TRAJ42-201ENST00000390495 CYP27B1O15528 508 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 CBFA2T3O75081 653 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 ABHD16AO95870 558 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 HHEXQ03014 270 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 OCA2Q04671 838 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 BMP8AQ7Z5Y6 402 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 ZNF843Q8N446 348 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 DAGLBQ8NCG7 672 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 SLC25A43Q8WUT9 341 aaPredicted RBP0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 RNF141Q8WVD5 230 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 CTAGE1Q96RT6 745 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 CBX8Q9HC52 389 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 STIM2Q9P246 746 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 PCDHA4Q9UN74 947 aa0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 POLR2AP24928 1970 aaKnown RBP0.68□□□□□ -2.3
TRAJ42-201ENST00000390495 IGKV6D-41A0A0C4DH26 115 aa0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 ATP9BO43861 1147 aa0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 TYRP1P17643 537 aa0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 CR2P20023 1033 aa0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 LMNB1P20700 586 aa0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 ENDOUP21128 410 aaKnown RBP0.67□□□□□ -2.3
TRAJ42-201ENST00000390495 TACR1P25103 407 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms